Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1501 ATGAACAACATTGACGAAACCTTTGACTTCGAAAACCTCAAAGTGGTCTCCGCCGTGGGACGCGGTGCCAAGGGCGTGGTGTTCTTGGCCAGAACCTACGACGGTTCGAAGGCCGAGCAGTGGCTGGCCCTGAAGGTGATCTCGAAAGCCGTAATTCAGAAGAAGAACAAGAGCAGTAGCCATTGCAAGAGGGCCTCGTTTGAACAGCAGATACTGCGTCGTTTTGATCACCCTCTCTTGCCACGGTTGCGAGGCGTCTTGGAGACTGAGGAGCTCGTTGGGTTCGCCATGGACTATTGCCACGGTGGGAACATGCATTCTCTCAGGAGAAGGCAGTCTGAGAAGACGTTCCCTAATGAAGCCATAAGGTTTTACGCTGTTGAATTGGTGCTAGCATTGGATTACTTGCACAATCTAGGAGTGGTGTACAGGGATCTGAAGCCAGAGAACATCCTAATCCAAGAAACGGGTCACATAATGCTCGTGGATTTCGACCTCTCCAAGAAGCTTAACCCAAAGTCACCGCAATCGCCGAGTGCCAACTGGTCGCCAAGTTCTGCCTCGGCGTCCCGTGCGATGGAGAAGTACCGGAGGAAGCGACTGTTATCACGTTTCTGTTATTGTCACTCGGGCGTCGTGCCTTACGACTCAGAGAGTCAACTCTGCATCAACCCGTCGCGTCGGAGCGACTCGGACTCGGTCGAGAAGTCCAACTCGTTTGTCGGTACGGAGGATTACGTGGCACCGGAGGTTATATCCGGGGAAGGACATGACTTCGGCGTTGATTGGTGGTCATTCGGCGTCGTTTTGTACGAGATGCTGAACGGGACGACGCCGTTTAAGGGCTCCAATAGGAAAGAAACGTTTCAACGGATTTTAACCGGGGAACTAGATCTAAGGGGAAAAACGACTCCGTTGGAGGACCTGATTCGAAAATTGCTTGATAAGGACCCTAACCGTAGGATGAGGGTCAATGAAATCAAGCGCCACGATTTCTTTAAAGGTGTGAAGTGGGACACGGTTCTACAAATTGCGCGTCCGCCATACATTCCGCAGAATGAAGTTGAGGACAAAGCGGGGTTTTCAAGAAAAGATGTGGAGTTGTTTGTCCATGGAATATTTTTCCCAAAGAAGAAGAACGAGCGAGAGAAAAGCGAAGAGGTGGAGGAAAAGAAGGATGGGGAGAAAAAGAATGGTGAAGAAGAGAATGGGAAGAATAACAACCATCATCATTATCACAACAATAACAGGAGAGTGTGGGTTGACAAATTGAATCAAAAATCTGTAAACGAAAAATTTCTAATTTTTTGA 1311 0.4905 MNNIDETFDFENLKVVSAVGRGAKGVVFLARTYDGSKAEQWLALKVISKAVIQKKNKSSSHCKRASFEQQILRRFDHPLLPRLRGVLETEELVGFAMDYCHGGNMHSLRRRQSEKTFPNEAIRFYAVELVLALDYLHNLGVVYRDLKPENILIQETGHIMLVDFDLSKKLNPKSPQSPSANWSPSSASASRAMEKYRRKRLLSRFCYCHSGVVPYDSESQLCINPSRRSDSDSVEKSNSFVGTEDYVAPEVISGEGHDFGVDWWSFGVVLYEMLNGTTPFKGSNRKETFQRILTGELDLRGKTTPLEDLIRKLLDKDPNRRMRVNEIKRHDFFKGVKWDTVLQIARPPYIPQNEVEDKAGFSRKDVELFVHGIFFPKKKNEREKSEEVEEKKDGEKKNGEEENGKNNNHHHYHNNNRRVWVDKLNQKSVNEKFLIF* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1501 436 SMART serkin_6 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1501 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Dod01g1501 436 SUPERFAMILY Protein kinase-like (PK-like) 8 352 IPR011009 -
Dod01g1501 436 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Dod01g1501 436 Pfam Protein kinase domain 235 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1501 436 Pfam Protein kinase domain 15 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1501 436 Coils Coil 378 398 - -
Dod01g1501 436 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 6 399 - -
Dod01g1501 436 Gene3D Transferase(Phosphotransferase) domain 1 234 352 - -
Dod01g1501 436 Gene3D Transferase(Phosphotransferase) domain 1 104 173 - -
Dod01g1501 436 ProSiteProfiles Protein kinase domain profile. 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1501 436 PANTHER FLIPPASE KINASE 1-RELATED 6 399 - -
Dod01g1501 436 MobiDBLite consensus disorder prediction 380 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1501 Dod-Chr1 36572771 36574652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1501 7 420 AGC Kinase Gene Family AT3G25250 52.719 1.10e-141 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod01g1501 Pkinase 1.9e-33 CL0016