Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1495 ATGGAAAATCAGTTCTTTCTCGATGCCGGTGTACCAACTCAGCTGCATTTTGAGCCATCACCACCTCAATCAATGCCCACTTGGCACTCACTGTCATCATCTCCCATGGATGTTCAAGCAACGGTTTTGAATTGTTCATCTGAGCAGACCCAAGACCGCTTCTACAACCCCTCATGGGAGAAGTCAACGGATCACGGCCTCCATTTTGATTCAGCACTGAGTTCAATGGTGTCGTCCCCCGCAGCTTCCAATTCCAACATGTCCAATGAGAATTTTGTCATCAGGGAACTGATAGGGAAATTGGGCAACATTGGTGGTAGCTCTGGTGAGATCTCAGCTCACTGTAAGCCTCTGGTTGGTGCATCTTCCTGCATGAATGGCAGCAACAGCACCACTAATTCATGCTACAGCACCCCTATGAGCTCTCCTCCAAAGGTCAACTACAACATCCCCACAGCAATGAGCCACTTGGTGAAAGAAAGCTTGCCTAGTTTGGGGAAATCAATGGCCTTAAATTCCAGTGTGGCAGAATTCTCAACTGATCCTGGCTTTGCAGAGAGAGCTGCAAAGTTCTCTTGCTTTGGAAGCAGGAGTCTCAATGGCAGGACCAGCCAACTGGGGCTGAACAATGCTGAGTTGATTCAGAGATGTGCTCCATTGATGGAAAATGGCAAGCTTCCAAGGGTCTCGAGTAGCCCATCGCTGAAAGTGCTTGGATCCCAAAAGGGAAAGAAGAATTCTCCACTGAGGGACCTAATGGGAGTGACTAACTCTCAAGAGGAATCCACAATCTCTGAGCTATCCCCAAATGGGGACAGTGGGATGAAACCTTCCCTTTATGTGAATTCCAGGAAGAGAAAAGCTTCTTCCAAAGGAAAAGCCAAAGAAACTTCAACTCCCACTAATAATCCTCCCACGGTTGCTGAAGCCAGTGAAGACTTAAATGCAAAGCGCAGCAAGCTCAATGAGGGTGAGGGAAATGAAAATGGACCTGTGAAGGCAGAGGATGAGACCGGAGAGGGAACCAGTAATGCTGGTGATGAGAAACACAAGAAGAGTAACGCAAAACCTACTGAACCTTCAAAGGATTACATTCATGTTAGAGCAAGAAGAGGTCAAGCCACTGATAGCCATAGTCTTGCAGAAAGAGTTCGGAGGGAGAAAATCAGTGAAAGGATGAAACTTCTACAAGATCTCGTTCCAGGTTGCAATAAGGTCACTGGCAAAGCACTTATGCTTGATGAAATTATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTCCTGTCTATGAAATTGGCTTCCGTCAATACCAGGCTGGATTTTAATATTGAAAGTCTAATCTCAAAAGATATATTTCAATCAAATAATTCTTTGGCACACCCAATATCCCCACTAGATTCCTCTGCTACAGCCTTTTATGGGCAACATCGCCAGCAAAACCCAGCAATCCACAATGACATTCCTAATGGAACTGTGACCCACTGCTCAGTGGACCCATTAGATATTGGTCTGTGCCAAAACCTTAGCATGCAGTTACCTTCCCTAAATGGGTTTAATAATGAAGGTGGCTCTCAGTATCCAATGACATTTTCTGAGGAATGA 1608 0.4552 MENQFFLDAGVPTQLHFEPSPPQSMPTWHSLSSSPMDVQATVLNCSSEQTQDRFYNPSWEKSTDHGLHFDSALSSMVSSPAASNSNMSNENFVIRELIGKLGNIGGSSGEISAHCKPLVGASSCMNGSNSTTNSCYSTPMSSPPKVNYNIPTAMSHLVKESLPSLGKSMALNSSVAEFSTDPGFAERAAKFSCFGSRSLNGRTSQLGLNNAELIQRCAPLMENGKLPRVSSSPSLKVLGSQKGKKNSPLRDLMGVTNSQEESTISELSPNGDSGMKPSLYVNSRKRKASSKGKAKETSTPTNNPPTVAEASEDLNAKRSKLNEGEGNENGPVKAEDETGEGTSNAGDEKHKKSNAKPTEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIESLISKDIFQSNNSLAHPISPLDSSATAFYGQHRQQNPAIHNDIPNGTVTHCSVDPLDIGLCQNLSMQLPSLNGFNNEGGSQYPMTFSEE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1495 535 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 373 423 IPR011598 GO:0046983
Dod01g1495 535 PANTHER BHLH TRANSCRIPTION FACTOR 2 535 - -
Dod01g1495 535 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 371 442 IPR036638 GO:0046983
Dod01g1495 535 MobiDBLite consensus disorder prediction 228 381 - -
Dod01g1495 535 SMART finulus 379 429 IPR011598 GO:0046983
Dod01g1495 535 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 535 IPR024097 GO:0006355
Dod01g1495 535 MobiDBLite consensus disorder prediction 251 277 - -
Dod01g1495 535 CDD bHLH_AtBPE_like 363 448 - -
Dod01g1495 535 Coils Coil 420 440 - -
Dod01g1495 535 Pfam Helix-loop-helix DNA-binding domain 377 424 IPR011598 GO:0046983
Dod01g1495 535 Gene3D - 370 446 IPR036638 GO:0046983
Dod01g1495 535 MobiDBLite consensus disorder prediction 313 381 - -
Dod01g1495 535 MobiDBLite consensus disorder prediction 294 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1495 Dod-Chr1 36084370 36086901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1495 1 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.009 8.78e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod01g1495 HLH 4.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1495 - - gmx:100787699 766.533