Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod01g1493 | ATGGAAGAAGACTTTGACATGCCCCAAGCGGAAGAGATGAACGAGGACTTCGATCTCGGCGACGACAGCCCCGTCCTTAAGGTTGGCGAGGAGAAGGAGATCGGCAAGCAAGGCCTCAAGAAGAAGCTCCTCAAGGAAGGCCAAGGCGGCTGGGACACCCCCGAAGTTGGCGATGAAGTTGAAGTTCACTACACGGGAACGTTGCTTGATGGGACTAAGTTCGACTCGAGCCGCGACAGGGATAGTCCCTTCAGGTTCACGCTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAAGACCATGAAGAAAGGCGAAAATGCTATTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCGCCTCCGACAATTCCTCCTAATGCGACACTCCAATTTGATGTCGAGCTGCTGTCGTGGAGTAGTGTGAAGGACATCTGTAAGGATGGTGGTATATTTAAGAAGATAATTACTGAGGGGGATAAATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAAGTTCGTCTGGAAGATGGAAAGCTTGTAGCTCAGTCTGATGGAGTGGAGTTCACTCTCAGGGAGGGTCATTACTGTCCTGCATTTTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGATTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAATGGGAAGCCAGCGGATGGGGCTGAAGGAGCTGTTCCACCAAATGCAACGTTGCAGATTACTCTTGAGTTAGTCTCTTGGAAGACTGTATCAGAAGTAACTGATGATAAGAAGATTATGAAGAAGATCCTCAAGGAAGGGGAAGGATTCGAACGTCCAAACGAGGGGGCCATAGTGAAAGTGAAACTAGTTGGTAAGCTGCAAGATGGCACTGTCTTTGTGAAAAAGGGCCATGATGAAGAAGAGAATCTGTTTGAATTCAAAACTGATGAGGAGCAAGTCATTGATGGGCTTGATAGAGCTGTGATGACCATGAAGAAGGGTGAGGTAGCATTATTGACTATTGCGCCTGAGTATGCTTTTGGTACATCAGAATCTCAGCAGGAGTTGGCTATGGTTCCTCCTAACTCAACTGTGGATTATGAGGTGGAGCTTGTTTCATTTGAGAAGGAGAAGGAGTCCTGGGATCTTGACACGAGAGAGAAAATTGAAGCTGCTGGTAATAAGAAAGAAGAAGGAAATGTTTTATTTAAAGCTGGTAAATATGCTAGAGCCTCCAAAAGATATGACAAGGCTGTAAAGTATATAGAGTATGATTCCTCCTTCAGTACAGAGGAGAAAAAACAAGCCAAGGCCTTGAAGGTTGCCTGCAATCTGAACAATGCTGCTTGCAAGTTGAAGTTGAAAGACTACAAAGAAGCGGAGAGATTGTGTACCAAGGTGTTGGGCATTGAGAGTAACAACGTGAAGGCTCTTTACAGAAGGGCCCAGGCATATATGGAGTTGGCTGATTTGGATTTGGCTGAATTTGACATTAAGAAAGCTCTTGAGATTGACCCGGACAACAGGGATGTCAAGCTGGAGTACAAGACATTGAAGGAAAAGGTGAAGGAGTTCAATAGAAAGGAAGCGAAATTTTATGGGAATATGTTCAACAAGATGACAAAGCTTGGTTCTTGA | 1662 | 0.4495 | MEEDFDMPQAEEMNEDFDLGDDSPVLKVGEEKEIGKQGLKKKLLKEGQGGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRDSPFRFTLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWSSVKDICKDGGIFKKIITEGDKWENPKDPDEVLVKYEVRLEDGKLVAQSDGVEFTLREGHYCPAFSKAVKTMKKGEKVILTVKPQYGFGENGKPADGAEGAVPPNATLQITLELVSWKTVSEVTDDKKIMKKILKEGEGFERPNEGAIVKVKLVGKLQDGTVFVKKGHDEEENLFEFKTDEEQVIDGLDRAVMTMKKGEVALLTIAPEYAFGTSESQQELAMVPPNSTVDYEVELVSFEKEKESWDLDTREKIEAAGNKKEEGNVLFKAGKYARASKRYDKAVKYIEYDSSFSTEEKKQAKALKVACNLNNAACKLKLKDYKEAERLCTKVLGIESNNVKALYRRAQAYMELADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKVKEFNRKEAKFYGNMFNKMTKLGS* | 554 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod01g1493 | 553 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Dod01g1493 | 553 | Gene3D | - | 148 | 262 | IPR046357 | GO:0003755 | |
| Dod01g1493 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 290 | 383 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | Coils | Coil | 516 | 536 | - | - | |
| Dod01g1493 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 168 | 259 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 286 | 380 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 53 | 142 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 269 | - | - | |
| Dod01g1493 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 173 | 262 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | Pfam | Tetratricopeptide repeat | 483 | 516 | IPR001440 | GO:0005515 | |
| Dod01g1493 | 553 | SMART | tpr_5 | 400 | 433 | IPR019734 | GO:0005515 | |
| Dod01g1493 | 553 | SMART | tpr_5 | 449 | 482 | IPR019734 | GO:0005515 | |
| Dod01g1493 | 553 | SMART | tpr_5 | 483 | 516 | IPR019734 | GO:0005515 | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 382 | 553 | - | - | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 382 | 553 | - | - | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 269 | - | - | |
| Dod01g1493 | 553 | Gene3D | - | 7 | 147 | IPR046357 | GO:0003755 | |
| Dod01g1493 | 553 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 271 | 382 | - | - | |
| Dod01g1493 | 553 | Gene3D | Tetratricopeptide repeat domain | 386 | 543 | IPR011990 | GO:0005515 | |
| Dod01g1493 | 553 | ProSiteProfiles | TPR repeat profile. | 483 | 516 | IPR019734 | GO:0005515 | |
| Dod01g1493 | 553 | SUPERFAMILY | FKBP-like | 34 | 149 | - | - | |
| Dod01g1493 | 553 | SUPERFAMILY | FKBP-like | 267 | 400 | - | - | |
| Dod01g1493 | 553 | Gene3D | - | 263 | 384 | IPR046357 | GO:0003755 | |
| Dod01g1493 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 57 | 145 | IPR001179 | GO:0003755 | |
| Dod01g1493 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 271 | 382 | - | - | |
| Dod01g1493 | 553 | SUPERFAMILY | TPR-like | 393 | 548 | IPR011990 | GO:0005515 | |
| Dod01g1493 | 553 | SUPERFAMILY | FKBP-like | 149 | 265 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod01g1493 | Dod-Chr1 | 35876456 | 35881231 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod01g1493 | 1 | 548 | Calmodulin-binding Proteins | AT3G25230 | 78.727 | 0.0 | 872 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod01g1493 | K09571 | - | gmx:100812632 | 953.355 |