Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1446 ATGGTGTTCTGTGATCACTGTGTTAAACACGTTTCCGGGTTGCGGATCGATGATGGTCCCTTATGTTGTAACCAATGTGGTAAGGTGTTGGAAGACTACCATTTTTCTCAAGAACCCACTTTTGTGAAAAACGCGTCCGGTCAGAGCCAATTATCTGGCAATTATGTCAGAACGATTCAAAGTGAGTATTCTGCTTCACGTCAAAGGACTTTAGATAGAGCTCGTGAGGAAATCGAATTCTTAAGTTTCGGCCTTGGAGTGAATGATGGTACTATGACCAACCAAGCTATGGCCTTTTACACAATAGCGCTTGAGCGGAATTTCACTAGGGGACGTAAATCAGAGCAAGTGCAGGCTGCTTGTCTGTATATTGCTTTCCGGGAAAATAATAAGCCATATCTTCTTATTGATTTCTCAAATCATTTAAGGACAAATGTTTATGTGTTGGGTGCAGTGTTTTTGCAGCTTTGTAAAGTATTGAGGCTTGAAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCCAGTCTTTTTATTTATAAATATACAAACAATTTGTTAAAGGAAAGGAATGTGCCTGTCTCTGAAACTGCACTGAGTATTATCGCCAGCATGAAACGTGACTGGATGCAGACAGGGAGGAAGCCCAGCGGATTATGTGGTGCAGCATTATACATGTCTGCTCTTGCACATGGTTTTAAGTGCTCTAAGTCAGATATTCTAAGAATCGTCCATGTATGTGAAGCAACATTGACCAAGCGGTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGAGGACTTGAATTCGATGGCTAAAGAACATGAGAAACAGCCAATTAAAGTACCAAATGGTGAACTGAATACTTCAAAGGATCTTCTATGTGAGCATAAGGATAGTGGTGTGCCCCATTTTGCACTTGGGTTATGTGAAACATGTTATAAGGATTTTGATAAACTCTCCGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATACCAGCGTGCTGAGAGGGAGAGAATAAAATCACTTTCTGAGGAAAGTGCCAATAAATCAGATGATATGGTGAAAACATCATCAAATGGTGCATGCGAAAGCCAAAAAGAAGAATTACGTGCCTCTGAGCCAGAAAGTATTGGGGCTGATGATGAGCACACAGCTGTTAAAGACCACCTTGGAGAATCACATAGAGAAGATGATATGAATACTAAAGCTGCGGATGAATCAGAAAGTCTCTCTGATATTGATGATCAAGAGGTTGACAGTTACCTTCACAATGAGGAGGAAAAGCATTACAAGAAGATTATCTGGGAAAATATGAACCGGGAGTATCTTGAGGAACAAGCAGCCAAGGAAGCAGCTGCAGCAGCTGCTAAGAAAGCTTTTGAGGCAAATTTTGAAAACTGTTCTGAGGATGTCCTAGCAGCAAGAGAACTTGTTGCAGAATCTGCTGCAGCTGTGGCAAAATCCAGGAAGGAAATGAAACAGAAACGAGCTCAAGAGGCAAAAAATTCAGGTCCTGCTCAATCTGCTGTAGAGGCTGCTCGCCAAATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTGGAAAAGTTGTTTGATGAACCTGCGCCTCAAGAGAATCCCAAGAAGGTACGATTTGAGGAACCAGCTGATAACCATGGTAATTTTGAGTCCAAGTTAGAGGACAAAATAAAGGATGATGCGGTGGGACCAGAGGATGATGGATTTGAGGATGGTGATGAGGCCGGAGGATTTGAGGATACTTTGTATCATGAAAATGTAGACGAGGCATATGATTATGACGATGATGGTTATGACTATGATGGTTATTGA 1854 0.4191 MVFCDHCVKHVSGLRIDDGPLCCNQCGKVLEDYHFSQEPTFVKNASGQSQLSGNYVRTIQSEYSASRQRTLDRAREEIEFLSFGLGVNDGTMTNQAMAFYTIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNHLRTNVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKERNVPVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALAHGFKCSKSDILRIVHVCEATLTKRLVEFENTESASLTIEDLNSMAKEHEKQPIKVPNGELNTSKDLLCEHKDSGVPHFALGLCETCYKDFDKLSGGLGGGLDPPAYQRAERERIKSLSEESANKSDDMVKTSSNGACESQKEELRASEPESIGADDEHTAVKDHLGESHREDDMNTKAADESESLSDIDDQEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKAFEANFENCSEDVLAARELVAESAAAVAKSRKEMKQKRAQEAKNSGPAQSAVEAARQMLRTKRLSSKVNYDRLEKLFDEPAPQENPKKVRFEEPADNHGNFESKLEDKIKDDAVGPEDDGFEDGDEAGGFEDTLYHENVDEAYDYDDDGYDYDGY* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1446 617 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Dod01g1446 617 Pfam Transcription factor TFIIB repeat 170 259 IPR013150 GO:0017025
Dod01g1446 617 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Dod01g1446 617 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Dod01g1446 617 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Dod01g1446 617 MobiDBLite consensus disorder prediction 370 413 - -
Dod01g1446 617 Pfam Brf1-like TBP-binding domain 415 540 IPR011665 -
Dod01g1446 617 Gene3D Single helix bin 392 457 - -
Dod01g1446 617 SUPERFAMILY Cyclin-like 75 163 IPR036915 -
Dod01g1446 617 MobiDBLite consensus disorder prediction 493 516 - -
Dod01g1446 617 CDD CYCLIN 173 248 IPR013763 -
Dod01g1446 617 CDD CYCLIN 96 143 IPR013763 -
Dod01g1446 617 MobiDBLite consensus disorder prediction 340 355 - -
Dod01g1446 617 MobiDBLite consensus disorder prediction 538 577 - -
Dod01g1446 617 Gene3D - 63 165 - -
Dod01g1446 617 Gene3D - 173 265 - -
Dod01g1446 617 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 543 IPR029529 GO:0000126|GO:0000995|GO:0006383
Dod01g1446 617 SUPERFAMILY Cyclin-like 172 265 IPR036915 -
Dod01g1446 617 MobiDBLite consensus disorder prediction 538 617 - -
Dod01g1446 617 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 543 IPR000812 GO:0006352|GO:0070897
Dod01g1446 617 MobiDBLite consensus disorder prediction 340 420 - -
Dod01g1446 617 MobiDBLite consensus disorder prediction 603 617 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1446 1 524 Inorganic Solute Cotransporters AT2G01280 41.431 5.55e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1446 K15196 - gmx:100817609 747.658