Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g1418 | ATGATCAAAGTTCCGGATTTCGCCGAAGCTTCATTCGTCACAAAAGAAGACACATGCAGAAGCATGTGCTTGGAGAATTGCTCTTGCATTGCATATTCATACGATTCCGGGATTGGCTGTATAACTTGGAATGATGATCCAATTGACATACAGCAATTTGCTGGGGAAGGAACTGATCTTTACATTCGTGTAGCCTATACAGAGCTTGAAGAGCTTTTAAACACAAAGGGGAAATGGGAAGATGGTCAGGAAATAGCTGTTAAAAGACTTTCCAAGGCATCTAGACAAGGGCTAGAAGAATTCATGAATGAAGCAGAGGTGATTTCCAAGCTTCAACACCGCAACCTTGTAAGACTTCTTGGGTGTTGTATTGAAGGAGATGAAAAGATTTTGATCTATGAGCACATGCGAAATAAAAGTTTGGATGCATTTATCTTTGATCCATCAAAAAGTAAACTCCTAAATTGGAGAAAACGCTTTTACATCATAGAAGGAATAGCTCGTGGATTACTTTATCTACATAGAGACTCCAGGCTAAAAATCATACATAGAGATTTGAAAGCAAGTAACATCTTGTTAGATGAGGAGCTAAATCCGAAGATATTAGACTTTGGTATGGCTAGAATGTTGGAGGGAGTGAAGATCAAGCCAATACCAAAAGGGTTGTTGGGACATAGTAAGTATGCCTTCTTTGTCCATAATTATAGTGACATATTATGGGATTTAACTATTTCATTTCATTACAGTGACTATATGTCTCCTGAATATGCGATGCAAGGATTGTTCTCAGAAAAATCAGATGTCTTTAGCTTTGGAGTTTTACTATTAGAGATTGTAAGTGGGAGAAGAAACACAAGTTTTTATGATGACAATGAGCGTGCATTGAGCCTTTTAGGATTTGACTCCTCTGTGTACAAGAACATGTTGTTGACAGGCCCCACTATGGCTATTTTAATATCAATGCTTAATAGTGAGATTATGAATCTTCCTCCTCCAAAGCAACCTGCATTCATCTTGAGGGAGAATATGATTAGTGCATTGCCTTTTGAAGAAAACCATGGTTTGTACTCCATCAACAATGTTAGTATTACAGATATCTATGGGAGATAG | 1110 | 0.3775 | MIKVPDFAEASFVTKEDTCRSMCLENCSCIAYSYDSGIGCITWNDDPIDIQQFAGEGTDLYIRVAYTELEELLNTKGKWEDGQEIAVKRLSKASRQGLEEFMNEAEVISKLQHRNLVRLLGCCIEGDEKILIYEHMRNKSLDAFIFDPSKSKLLNWRKRFYIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKILDFGMARMLEGVKIKPIPKGLLGHSKYAFFVHNYSDILWDLTISFHYSDYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNTSFYDDNERALSLLGFDSSVYKNMLLTGPTMAILISMLNSEIMNLPPPKQPAFILRENMISALPFEENHGLYSINNVSITDIYGR* | 370 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g1418 | 369 | SMART | serkin_6 | 66 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod01g1418 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 135 | - | - | |
Dod01g1418 | 369 | ProSiteProfiles | Protein kinase domain profile. | 48 | 369 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod01g1418 | 369 | SMART | ntp_6 | 2 | 64 | IPR003609 | - | |
Dod01g1418 | 369 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 312 | 366 | - | - | |
Dod01g1418 | 369 | Pfam | PAN-like domain | 2 | 49 | IPR003609 | - | |
Dod01g1418 | 369 | Pfam | Protein kinase domain | 80 | 286 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod01g1418 | 369 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 76 | 216 | - | - | |
Dod01g1418 | 369 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 250 | 302 | - | - | |
Dod01g1418 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 181 | 193 | IPR008271 | GO:0004672|GO:0006468 | |
Dod01g1418 | 369 | ProSiteProfiles | PAN/Apple domain profile. | 1 | 65 | IPR003609 | - | |
Dod01g1418 | 369 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE | 1 | 68 | - | - | |
Dod01g1418 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 76 | 294 | IPR011009 | - | |
Dod01g1418 | 369 | CDD | PAN_AP_plant | 1 | 65 | - | - | |
Dod01g1418 | 369 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 1 | 68 | - | - | |
Dod01g1418 | 369 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 76 | 216 | - | - | |
Dod01g1418 | 369 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 250 | 302 | - | - | |
Dod01g1418 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 136 | 338 | - | - | |
Dod01g1418 | 369 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 312 | 366 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g1418 | Dod-Chr1 | 31990479 | 31992574 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g1418 | 76 | 369 | Receptor kinase-like Gene Family | AT4G23140 | 43.976 | 2.98e-79 | 254 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Dod01g1418 | Pkinase | 1.4e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g1418 | - | - | qsu:112022912 | 357.836 |