Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1418 ATGATCAAAGTTCCGGATTTCGCCGAAGCTTCATTCGTCACAAAAGAAGACACATGCAGAAGCATGTGCTTGGAGAATTGCTCTTGCATTGCATATTCATACGATTCCGGGATTGGCTGTATAACTTGGAATGATGATCCAATTGACATACAGCAATTTGCTGGGGAAGGAACTGATCTTTACATTCGTGTAGCCTATACAGAGCTTGAAGAGCTTTTAAACACAAAGGGGAAATGGGAAGATGGTCAGGAAATAGCTGTTAAAAGACTTTCCAAGGCATCTAGACAAGGGCTAGAAGAATTCATGAATGAAGCAGAGGTGATTTCCAAGCTTCAACACCGCAACCTTGTAAGACTTCTTGGGTGTTGTATTGAAGGAGATGAAAAGATTTTGATCTATGAGCACATGCGAAATAAAAGTTTGGATGCATTTATCTTTGATCCATCAAAAAGTAAACTCCTAAATTGGAGAAAACGCTTTTACATCATAGAAGGAATAGCTCGTGGATTACTTTATCTACATAGAGACTCCAGGCTAAAAATCATACATAGAGATTTGAAAGCAAGTAACATCTTGTTAGATGAGGAGCTAAATCCGAAGATATTAGACTTTGGTATGGCTAGAATGTTGGAGGGAGTGAAGATCAAGCCAATACCAAAAGGGTTGTTGGGACATAGTAAGTATGCCTTCTTTGTCCATAATTATAGTGACATATTATGGGATTTAACTATTTCATTTCATTACAGTGACTATATGTCTCCTGAATATGCGATGCAAGGATTGTTCTCAGAAAAATCAGATGTCTTTAGCTTTGGAGTTTTACTATTAGAGATTGTAAGTGGGAGAAGAAACACAAGTTTTTATGATGACAATGAGCGTGCATTGAGCCTTTTAGGATTTGACTCCTCTGTGTACAAGAACATGTTGTTGACAGGCCCCACTATGGCTATTTTAATATCAATGCTTAATAGTGAGATTATGAATCTTCCTCCTCCAAAGCAACCTGCATTCATCTTGAGGGAGAATATGATTAGTGCATTGCCTTTTGAAGAAAACCATGGTTTGTACTCCATCAACAATGTTAGTATTACAGATATCTATGGGAGATAG 1110 0.3775 MIKVPDFAEASFVTKEDTCRSMCLENCSCIAYSYDSGIGCITWNDDPIDIQQFAGEGTDLYIRVAYTELEELLNTKGKWEDGQEIAVKRLSKASRQGLEEFMNEAEVISKLQHRNLVRLLGCCIEGDEKILIYEHMRNKSLDAFIFDPSKSKLLNWRKRFYIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKILDFGMARMLEGVKIKPIPKGLLGHSKYAFFVHNYSDILWDLTISFHYSDYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNTSFYDDNERALSLLGFDSSVYKNMLLTGPTMAILISMLNSEIMNLPPPKQPAFILRENMISALPFEENHGLYSINNVSITDIYGR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1418 369 SMART serkin_6 66 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1418 369 Gene3D Phosphorylase Kinase; domain 1 56 135 - -
Dod01g1418 369 ProSiteProfiles Protein kinase domain profile. 48 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1418 369 SMART ntp_6 2 64 IPR003609 -
Dod01g1418 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 312 366 - -
Dod01g1418 369 Pfam PAN-like domain 2 49 IPR003609 -
Dod01g1418 369 Pfam Protein kinase domain 80 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1418 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 76 216 - -
Dod01g1418 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 250 302 - -
Dod01g1418 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Dod01g1418 369 ProSiteProfiles PAN/Apple domain profile. 1 65 IPR003609 -
Dod01g1418 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 68 - -
Dod01g1418 369 SUPERFAMILY Protein kinase-like (PK-like) 76 294 IPR011009 -
Dod01g1418 369 CDD PAN_AP_plant 1 65 - -
Dod01g1418 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 68 - -
Dod01g1418 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 76 216 - -
Dod01g1418 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 250 302 - -
Dod01g1418 369 Gene3D Transferase(Phosphotransferase) domain 1 136 338 - -
Dod01g1418 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 312 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1418 Dod-Chr1 31990479 31992574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1418 76 369 Receptor kinase-like Gene Family AT4G23140 43.976 2.98e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod01g1418 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1418 - - qsu:112022912 357.836