Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1417 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAGCCAGCTAACACTAAGCTATCAAGCAACAAGACAGTCAGAAGGATTCGGGTCAGAGGTGGCAATGTGAAATGGAGGGCATTGAGATTGGATACTGGAAATTATTCATGGGGAAGTGAAGCAGTGACTCGCAAGACTCGTATACTGGATGTGGTCTACAATGCCTCAAATAATGAGCTTGTTCGTACTCAGACCCTTGTTAAAAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGATATTGGTAGGAAGAAGAAAACAGCCACAAAGAAGGACACTACAGAGGAAGGTGAAGCTGCTGCAGAAGAAACCAAGAAAAGCAACCATGTGCAGAGGAAACTGGAGAAACGCCAGAAAGATCGCAAGCTTGATCACCATATTGAGGAGCAGTTTGCTGGTGGGCGATTACTGGCCTGCATTTCTTCTCGACCTGGTCAATGCGGCAGGGCTGACGGCTACATTCTGGAAGGTAAGGAGCTGGAATTTTACATGAAGAAGATCCAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 654 0.4709 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTATKKDTTEEGEAAAEETKKSNHVQRKLEKRQKDRKLDHHIEEQFAGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1417 217 MobiDBLite consensus disorder prediction 127 162 - -
Dod01g1417 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Dod01g1417 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Dod01g1417 217 Gene3D - 32 160 - -
Dod01g1417 217 Gene3D - 161 214 - -
Dod01g1417 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Dod01g1417 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Dod01g1417 217 MobiDBLite consensus disorder prediction 11 26 - -
Dod01g1417 217 CDD Ribosomal_S8e_like 5 196 - -
Dod01g1417 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Dod01g1417 217 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1417 Dod-Chr1 31860910 31863403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1417 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.922 8.30e-128 357