Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1413 ATGGCCAACACCAATAGAATGGTCTGCTTGCTCTTACTTCACATTTTCCTAAGCTTTGTGTTGACCCAATCAGCACCTGAAGGGTCTCTTGTAAAACAGCTTCCAGGCTTCGTCGGCAATCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGATGAACATCATGGAAGGAACTTGTATTATTATTTTGTGGAATCAGAAGGTAAACCGAGTGAGGACCCAGTGCTTCTGTGGCTTAACGGTGGTCCAGGGTGCTCTAGCTTCGATGGCTTCGTATACGAGCATGGTCCTTTTAATTTTGAGAAACCACAGAATCAAGGAGCCCTGCCTAAATTGCGACTCAATCCATATAGCTGGTCAAAGGTTTCCAATATCATATACTTGGATTCTCCTGCTGGAACGGGGTTTTCATACTCAAAGAATGAATCAGATTACAACACTGGAGATGTGAAGACTGCCTATGATGCACATATGTTTCTCCTCAAGTGGTTTCAACTATACCCTGAGTTCCTTGGCAACCCCTTCTTCATTGCTGGAGAGTCATATGGTGGAGTTTATGTGCCTAATCTTGCTCTACAAATAGTGGAAGGAATTGATGCTGGTGTAAAGCCCAATCTGAATTTCAAGGGCTACATGGTTGGAAATGGTGTTACTGATGATCACTTTGATGCCAATGCTATTATTCCATTTGCACATGGGATGGGTCTTATTTCAAATGAGATGTTCGAGGATATAAAAAATGTGTGCAAAGGAAAATACTATGATCCTGAAATTGCTGATTGTACAGCAAAGCTTTCAAAAGCTAACGAGGTCGTTGCTGGGTTAAACATATACGACATTCTGGAACCATGTTATCATGGCAACGGCAGAAACGCAGCGGAGAATACAACATCCAATAATAGGTTGCCATTAAGCTTTAATCAATTGGGTTACACAGAGAGACCTTTGCCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTGGGGCTCCCGTGAAAGATGGAATCGTACCAACTTGGCCAGAAATTAGCAATAGCGTTTATGTTCCATGCACGGATGATGAAGTTGCTACCATATGGCTGAACAATGAAGCGGTCAGGAAAGCAATTCACACTGTAGAGAAAAGTGTGGTTAGTCGTTGGGTGTTATGCTCGGGTCAAATTCGTTACAATCATGATACTGGTAGCATGATCAAGTTCCACAGGATCCTAACTTCTAGAGGATATCGGGCACTAATATACAGTGGTGACCATGACATGTGTGTTCCATTTACTGGGACCCAAGCATGGACGAGTTCAATGGGATATAAGATTGTTGATGAATGGAGGCCTTGGTCAGTTGATGGTCAAGTTGCTGGATTTACACAAGGATATGAGAAAAATCTCACATTTCTGACCATTAAGGGATCTGGGCATACTGTTCCAGAATACAAACCAAAAGAGGCATTGTATTTTTATAAACATTTCCTAGATGGATTGCCTGTATAA 1494 0.4244 MANTNRMVCLLLLHIFLSFVLTQSAPEGSLVKQLPGFVGNLPSKHYAGYVTVDEHHGRNLYYYFVESEGKPSEDPVLLWLNGGPGCSSFDGFVYEHGPFNFEKPQNQGALPKLRLNPYSWSKVSNIIYLDSPAGTGFSYSKNESDYNTGDVKTAYDAHMFLLKWFQLYPEFLGNPFFIAGESYGGVYVPNLALQIVEGIDAGVKPNLNFKGYMVGNGVTDDHFDANAIIPFAHGMGLISNEMFEDIKNVCKGKYYDPEIADCTAKLSKANEVVAGLNIYDILEPCYHGNGRNAAENTTSNNRLPLSFNQLGYTERPLPVRKRMFGRAWPLGAPVKDGIVPTWPEISNSVYVPCTDDEVATIWLNNEAVRKAIHTVEKSVVSRWVLCSGQIRYNHDTGSMIKFHRILTSRGYRALIYSGDHDMCVPFTGTQAWTSSMGYKIVDEWRPWSVDGQVAGFTQGYEKNLTFLTIKGSGHTVPEYKPKEALYFYKHFLDGLPV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1413 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 494 IPR001563 GO:0004185|GO:0006508
Dod01g1413 497 SUPERFAMILY alpha/beta-Hydrolases 31 496 IPR029058 -
Dod01g1413 497 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Dod01g1413 497 Pfam Serine carboxypeptidase 35 494 IPR001563 GO:0004185|GO:0006508
Dod01g1413 497 Gene3D alpha/beta hydrolase 23 310 IPR029058 -
Dod01g1413 497 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 16 494 - -
Dod01g1413 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Dod01g1413 497 Gene3D - 349 496 - -
Dod01g1413 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Dod01g1413 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Dod01g1413 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Dod01g1413 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1413 Dod-Chr1 31788540 31794764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1413 358 497 Calmodulin-binding Proteins AT2G22960 44.286 1.13e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1413 K16296 - gmx:100792057 773.852