Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1404 ATGGATTTATGGGATTCATGGGCTGGTTTCTTTCTTTTTTGTAGCTTCTGGGTTGTCACTTTCAGTGGACAAGACGGTTTCTTGAGTATATCTTGTGGTGGAACAACCAGTTTCAGTGATTCATCTAACATCTCATGGGTCCCAGACACTACCTACATTACCTCAGGCAAGACAACCACCATCAATTACAGTGATGGCTCCTCCTCAGAGAATGTCTCAGCTCGGTTCTTCCCGGATTCAAGAGGTCGCACATGCTATAGGATACCAGTGACCAATGCAACCACTTTGGTTCTTGTGAGAGCAAAATTTGTGTACAAGAACTACGATGGACTGGGAAAGCCACCTACATTCTCTGTTTCTATTGGGACAGCTATTGCTGCTAATGTAAATCTCAGTAAAGATGATCCAAGGACAGAAGAGTTTCTCTGGACAGTCAATAAGGACACACTGCCATTATGTTTAAATGCAATTCCAAGGGGTGGTTCTCCTGTAATTTCTTCAATTGAAATCAGACCACTTCCTAAAGGATCCTACACAAATGGCAAAGAGGATTTTCCAAATAAATTACTTAGGAGGAGCTATCGCATTGATTGTGGCTACACCAATGAGTCTATTCAGTATCCCATGGATCCATATGATAGAATATGGAATGCTGATAGAAGTTTCACACCATTTCATGCTGCAACTGGGTTTAAGATTCAAAGTAGCTTCAACCAATCTAATCTTGTGGAGCAACCACCGGCTGCGGTTCTTCAGACTGCGAGAGTCTTGGCACGACAAAATGTGCTGGCATATAACCTCCCTCTTGATGCATTAGGGGACTACTACATCATACTCTATTTTTCTGGAATTCTTCCTGTGTTCCCCTCATTTGATGTATTGATAAATGGAGATCTTGTAAAATCAAACTATACAATAAAGAGCTCAGAAATCAGTGCTTTGTATGTCATACAGAAGGGAATCAGCAGCTTAAAAATAGCACTAAGGGGAATCAGCTTCTACCCTCAGATCAATGCATTTGAGGTATATAGTATGATTGATGTTCCATCTGAAGCCTCCTCAACCACAGTTTCAGCTATGCAGGTTATTCAGCAATCCACTGGCTTGGATTTAGGATGGCAAGATGATCCATGCTCCCCTTTCCCATGGGATCATGTTAATTGTGAAGGAAGCCTTGTTACTTCATTGGATCTCTCGCACATAAATTTGAGATCAATTACTCCCACATTTGGTGACTTATTGGACCTTAAAACACTGGATTTACACAACACATCACTTGCTGGTGAAATACAGAATTTGGGTAGCTTGCAACATCTTGAAAAACTGAACCTTAGTTTCAATCAGCTAACATCATTTGGTGAAGAGCTCGAGAATTTGATTAGCCTACGAATATTGGACTTGCAAAACAATAGTCTACAGGGAACAGTTCCAGATAACTTGGGAGAGTTAGAGAACCTCCACTTACTGAATCTGGAAAGCAACAAACTACAAGGTCCACTTCCGCAGTCTTTGAACAAAGAAACCTTAGAGATCAGAACATCTGGCAATTTGTGCCTCAGTTTTTCCACAGTCACATGTGATGATGCATCCTCCAATCCTTCAATTGAGACCCCGCAAGTGACTATAATTCCCATAAAGAAGCACAAAGCACATGACCATCTAGCAATCATACTAGGCGTGGTTGGAGGAGCTACGCTTGCCCTTATAATGATATGTCTTTCAGTATTTATATACGTTGCTAAAAAGAGATACAAAGTCTCCCACATTGCAAGGGGGCAAACGGATATGAGGAACTGGGGTGCAGAAAAAGTCTTTTCGTACAAGGAAATCAAAGCAGCCACAAGCAATTTTAAAGAAGTCATAGGACGGGGAAGTTTTGGATCTGTTTACCTTGGAAAGCTTCCGGACGGAAAATCAGTAGCTGTCAAAGTTCGGTTTGACAAATCCCAACTTGGGGTTGATTCTTTCATCAATGAGATTCATCTCTTGTCGAAAATACGGCATCAAAATCTTGTGTCTCTGAAAGGATTTTGTCATGAATCAAAGCACCAGATATTAGTTTATGAGTACTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGCCAAAAAACTCCCTTGAGCTGGGTTCGAAGGTTGAAAATTGCAGTTGATTCAGCAAAAGGATTGAATTATTTGCACAATGGAAGTGAACCACGAATCATACACCGTGATGTCAAGTGTAGTAACATCCTTTTGGATATGGAGATGAATGCCAAGGTCTGTGACTTTGGCCTCTCTAAGCAAGTAACCAAGGCAGATGCAACTCATGTGACCACTGTTGTCAAAGGAACTGCTGGGTATCTAGATCCAGAGTACTATTCTACCCACCAGCTTACAGAAAAAAGTGATGTATACAGCTTTGGAGTCGTTCTTTTGGAACTCATTTGTGGGAGAGAGCCATTGACTCACTCTGGAACTCCTGATTCATTCAATTTGGTGTTATGGGCCAAGCCCTACTTGCAGGCCGATGCCTTTGAAATTGTGGATGAAAGCATACAAGGAACTTTTGATCTGGAAAGCATAAGGAAGGTGGCCCTCATTGCTATAAAGTCGGTGGAAAGGGATGCATCACAGAGGCCACCTATTTCAGAGGTGTTAGCAGAGCTTAAGGATGCTTACAATATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA 2715 0.4166 MDLWDSWAGFFLFCSFWVVTFSGQDGFLSISCGGTTSFSDSSNISWVPDTTYITSGKTTTINYSDGSSSENVSARFFPDSRGRTCYRIPVTNATTLVLVRAKFVYKNYDGLGKPPTFSVSIGTAIAANVNLSKDDPRTEEFLWTVNKDTLPLCLNAIPRGGSPVISSIEIRPLPKGSYTNGKEDFPNKLLRRSYRIDCGYTNESIQYPMDPYDRIWNADRSFTPFHAATGFKIQSSFNQSNLVEQPPAAVLQTARVLARQNVLAYNLPLDALGDYYIILYFSGILPVFPSFDVLINGDLVKSNYTIKSSEISALYVIQKGISSLKIALRGISFYPQINAFEVYSMIDVPSEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWDHVNCEGSLVTSLDLSHINLRSITPTFGDLLDLKTLDLHNTSLAGEIQNLGSLQHLEKLNLSFNQLTSFGEELENLISLRILDLQNNSLQGTVPDNLGELENLHLLNLESNKLQGPLPQSLNKETLEIRTSGNLCLSFSTVTCDDASSNPSIETPQVTIIPIKKHKAHDHLAIILGVVGGATLALIMICLSVFIYVAKKRYKVSHIARGQTDMRNWGAEKVFSYKEIKAATSNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVSLKGFCHESKHQILVYEYLPGGSLADHLYGTNSQKTPLSWVRRLKIAVDSAKGLNYLHNGSEPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTHQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQADAFEIVDESIQGTFDLESIRKVALIAIKSVERDASQRPPISEVLAELKDAYNIQLRFLESCQNEN* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1404 904 ProSiteProfiles Protein kinase domain profile. 615 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1404 904 Gene3D Transferase(Phosphotransferase) domain 1 691 900 - -
Dod01g1404 904 SUPERFAMILY Protein kinase-like (PK-like) 595 886 IPR011009 -
Dod01g1404 904 Gene3D Ribonuclease Inhibitor 355 528 IPR032675 -
Dod01g1404 904 PANTHER OS07G0107800 PROTEIN-RELATED 10 899 - -
Dod01g1404 904 Pfam Malectin-like domain 30 345 IPR024788 -
Dod01g1404 904 SUPERFAMILY L domain-like 359 506 - -
Dod01g1404 904 Gene3D - 192 346 - -
Dod01g1404 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Dod01g1404 904 CDD STKc_IRAK 621 887 - -
Dod01g1404 904 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 899 - -
Dod01g1404 904 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Dod01g1404 904 SMART LRR_typ_2 436 458 IPR003591 -
Dod01g1404 904 SMART LRR_typ_2 459 483 IPR003591 -
Dod01g1404 904 Gene3D Phosphorylase Kinase; domain 1 579 690 - -
Dod01g1404 904 Pfam Protein tyrosine and serine/threonine kinase 617 885 IPR001245 GO:0004672|GO:0006468
Dod01g1404 904 SMART serkin_6 615 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1404 904 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1404 Dod-Chr1 31554540 31560608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1404 10 899 Receptor kinase-like Gene Family AT5G48740 63.483 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dod01g1404 Malectin_like 1e-54 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1404 - - gmx:100812804 1494.95