Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1403 ATGTCTCTTCCAAGACCCACAGAGGGTAAACCAAACAACAACGCTCTTCGGCAGCTGATGAAGGAAGGAGTAGCAGCAGAAGCGGCACCGGAACCCTCTTCCTCCTCCTCTCCGTCATGGAATAGGATCAACAACAACCCCGGAAACTCTTTTCCTCCTATACCTCCACACAGGAGAAGCAAACCCGAAGATAGCGATGAGGATCTGTTCACGGTTCCCGATGTGGAAGCCATGCCGAGTGTCCATTCTGCAGTGACGAACCCAAGTAGTAACCTAAATCAAAGCACTGCAACAGACCCTCAGCTTCAAACTGCAGGCTTCTCCGGAAAACGCCGCCGTGGAAGAAACCCTGTAGACAAGGAGTACAGACGCCTGAAGAGGTTATTGAGGAACAGGGTTTCTGCCCAACAAGCCCGTGAAAGAAAGAAGGTCTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAGGACAAGAATTCCAAGTTAGAAGAGCGTATTTCGACATTAATCAATGAGAACACCATGCTCCGGAAGGTAACATGGCCTGAAATAAAGTTCCACCATCTATCAGTTATATTCCATTCTAATGTGCAGGAATGCGTTTTGTTACGTAAATTGATTATGCTTTTTATCAGATTGAAGTATGTTGAATGTATACTGGCAGGTTCTTATGAATACGAGGCCTAA 690 0.4609 MSLPRPTEGKPNNNALRQLMKEGVAAEAAPEPSSSSSPSWNRINNNPGNSFPPIPPHRRSKPEDSDEDLFTVPDVEAMPSVHSAVTNPSSNLNQSTATDPQLQTAGFSGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSKLEERISTLINENTMLRKVTWPEIKFHHLSVIFHSNVQECVLLRKLIMLFIRLKYVECILAGSYEYEA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1403 229 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 141 IPR004827 GO:0003700|GO:0006355
Dod01g1403 229 Gene3D Single helix bin 142 181 - -
Dod01g1403 229 MobiDBLite consensus disorder prediction 30 48 - -
Dod01g1403 229 CDD bZIP_HY5-like 133 174 - -
Dod01g1403 229 SUPERFAMILY Leucine zipper domain 122 179 IPR046347 GO:0003700|GO:0006355
Dod01g1403 229 MobiDBLite consensus disorder prediction 82 105 - -
Dod01g1403 229 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 30 180 IPR044280 GO:0000981|GO:0045944
Dod01g1403 229 SMART brlzneu 119 183 IPR004827 GO:0003700|GO:0006355
Dod01g1403 229 Pfam bZIP transcription factor 120 179 IPR004827 GO:0003700|GO:0006355
Dod01g1403 229 MobiDBLite consensus disorder prediction 1 117 - -
Dod01g1403 229 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 121 178 IPR004827 GO:0003700|GO:0006355
Dod01g1403 229 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 30 180 - -
Dod01g1403 229 Coils Coil 139 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1403 Dod-Chr1 31500071 31504944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1403 101 189 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 70.652 2.12e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g1403 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1403 K16241 - gmx:100783826 217.238