Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1366 ATGGCACTAAATAAGATAGGTAACAAGTTAGGTACTAACACTGGGAAGGACCCTGGCTTGTTTCCTCAACACATCCAGCCTGAATTACTCAGCGGTGTTTCAAATACAGTACAGGATTTGCATAATAGTGCTCCTACACAGGCAGGGGGAGGATTTTCTGTGAATTTTGGTCAAGATAGAATTGCTGCTGCAAGAGTTCCTGCTTCGAATGATATATCTCGAAATCTTGAGAATACATTTGTGTTGAGTGGGGAGAATGGCCATGCGAGATATGAAGATCTTACTAATATTTTGGGTTTGAGAAGAATGGAACCTGAAAGTGTTTCAAACATATCTGACATTATCTCTCTAAAACAGCCAGCACAGGAGATGGAAAATGGGGTTTCTGCAGACATTTTAAACAAAATACATATTGGGGCTGGCGATGGTGCCCATGCATTGAGGAAGTCTGTTCGTGAATCAATTGCTGACCAACCTGGTGTCAGGCCAGCTGTATCAACCCTTCCCAGAAATGAATCTTCTCATTCCAGTAGATTTTCTGGTTCAGGAATTTTAGATGATTCCAAGCCTGGCAAAATGAAACTTCTATGCAGCTTTGGTGGAAAAATATTACCCAGGCCCAGTGATGCGAGGCTCAGATATGTCGGAGGAGAGACCCGCATTATATCTATACGAAAGGATATTTCGTGGGATGAGCTTGTGAAGAAGACCTTGGGTATTTGCAGGCAACCTCACACAATCAAATACCAGCTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTTTCTTCTGATGAGGATCTTCAAAATATGATAGAGGAATACCATGGGATTGAAATGCATGAAGGTTCTCAAAGACTCAGAATATTTTTGGTTCCTTTGGTTGAATCTGAGGAGACACCATCAACTGAGGTGAGCACTGTTCAGCAGAGTGATCCTGATTACCAGTATGTCGTTGCCGTTAATGGCATGGTTGACCCTAGTCCTAGGAAAAGCATTGGTGGGCAGAGTTTGAATAATGAAGCAAGTCCATTAGAGACAAGTATGAATTTTGCCCCAGCTTTTCCAGAAATTTCTCCAACCTCCTCCTCTCTGTTGGAGATCAGGGATGATATTAATGCTTTAAATGCCGATGGGATTTTGAATGATTCCCTGAATCTGCAAAGATCCCCACCAATGTCTCCTATTCCAGTTCAGGCATCAGGTTCCAGCACAGGTTATGTACAACTAGTTGGTAATAACTCATGTCAGGGGAGTATTGACAGCAATGCATCATTTGTTACTGCTCAGTTACCCCCTGAGAACCCCAGCATAAGCACTGGTGATCACAGATACCCTCAACAAGTAGCTTTTACTTTGTTAAGTGATAGTCACCCTTATGAACATGGTGATGTTGGGCAGCCCAAGAAGCTCAATGGACAGCATTTTGGCCACTACAATGCTGGCAAGGAATTTGTGACTCCTGTACATGTTGACCCAGGTGATGGTTACAGTGATGAATTTTTCGGTGAAAGGCTGTTGCATAAGGAAAAAAGATTCTACCCTGGAAATCCTCTTTCATGCTTGGGAGATCCAATCTGTCAACAGGCTGAATCTAATGGAATTTCTGATTCCTCTTATGGGTTGCCTCATGCCTTTTCTGATTCGCAGTTGCATGAGAGTGCAGCAAGGTCTGGTTACTGCTCACAAGAAGGAATTGGCCATTCTTTCTCCTTGAACCTTGAAAATGCTCAGTTATCTTCAATGGTACTTTCTAATGTCTCACAAGGGAACCTTATGGGTGTTCAGCTTGATTCCATTCTCCATCATACTCAAATACAAAGAATGATACCAAACGTTGACTCAACCGAGCTGCACAGAAGGCAAGAAATGTCATCTTCTTCTCCATATTTAGAATCATTAGCAATGAATGATCATGTTCATAAGGATAGCTTTTCAACTGAAAAAAGGTACCCTATTGCACAGACTGGCTTGAGTGGATCTAGCTTTGTAGCGAAGGATATTCAAGACAATTCTGAGAAATTAGAAAAGATGAAGATTGAACAGAATAATCCTGTTCTGAGTAAGGATAGCAAGGTTTATGAGGAGAAATCAGCCATCATTGATATGGGAAATGTGACTGAATCGCATCTTTTGGATTCCTTACCTGCTAATAACTTAAATACTAAGATTAATGTGCAAAAGAATTTGGGGATAGCTTCTGAGGATAGAATTCCTGCATCATCAGGCATGGTGGAAGTTTCTTCATATAATGTTGTGGACAAGATCCCATCTGATCTTCCTGAGATGAGCCAAAGGACTAGAGACTGCAAGAAATGTGCATTGGCTGAAGGTCTGAATAGTGAACAAGATATTGAATTTTCATTGACCAGATGTTTTGATTTAAATGCTCCATTAAAGTGTGAAGAAAGCTATTGTGACAAAACTTCTCTGGGAGATAATTTGTTCGAGCTGTCCATTAACCCAGCTTCTCTTAAATCTACACAGATTCAGCTTCCTGAGAACCAGTTGGCTACAGGCTTTCCTGAAAATCCAGGCCAGAATATTTCTTTTAACAAGGAACCTATGCTTGATGAATTGTTTACGGGTACTGATCAAATGGTTGGTCAGTTTAGTGTTGAACACACTGCATCTGGAAAGCCAAAAGTTGAAGATGTGATGTCAGGACAATCAAAAAATATACAAAGGTATAATGCTGCAAATCGAGTGGAGCCATTTGTCATGGTAGAAGATGTGACTCGTGTTGTTCCTCCAGATATTGAGACTTCATTTGTACCCACTCCCCATATTGTGGATGAAGTTGGGAGTGACGCTGTATCCCCATCTCATATGGAAGAAGAAAGCATCCTTCCAGAGTCAGAACCGGAGGATACTATAGATGATCAAGCAGACAAGAATGAATTCCTTTGTGATGCAATGATAGCAGAAATGGAAGCCAGCCTATATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTCTGGAGTTAGGGTCTGGTACTTATGGAACTGTCTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTTCAGGGAGATCTTCTGAGCAAGAACATTTGGCAAAAGACTTCTGGAGAGAGGCACAGATCCTCTCAAATCTTCATCATCCCAATGTAGTTGCATTTTACGGGATAGTACCAGATGGGGCTGGTGGAACTCTAGCAACTGTAACAGAGTACATGGTTAATGGTTCCCTTCGGCATGTCCTTGTCAAGAAAGACAGATTACTAGATCGTCGTAAAAAGCTAATCATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAACTTGCTGGTCAATCTAAGGGATCCCCAACGACCCATATGCAAGGTTGGAGATTTTGGATTGTCAAGAATTAAACGTAATACCCTTGTATCTGGGGGTGTGCGAGGAACCCTTCCGTGGATGGCACCAGAGCTGTTGAATGGTAGCAGCAGCCAGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTGACAGGGGAGGAACCTTATGCAGACATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACTCTTCGACCACCTATTCCAGAACGCTGTGATCCTCAATGGAGGAAACTCATGGAAGAGTGTTGGTCAGCTGACCCCGTTAGCCGACCATCGTTCACGGAGATAACCAACCGGTTACGATCCATGTCTGTTGCCCTTCAAGCGAAGGGGAATTGTCAGACACGGCAGCTAAGACCTGGTAGTGCTTCTTGA 3840 0.4208 MALNKIGNKLGTNTGKDPGLFPQHIQPELLSGVSNTVQDLHNSAPTQAGGGFSVNFGQDRIAAARVPASNDISRNLENTFVLSGENGHARYEDLTNILGLRRMEPESVSNISDIISLKQPAQEMENGVSADILNKIHIGAGDGAHALRKSVRESIADQPGVRPAVSTLPRNESSHSSRFSGSGILDDSKPGKMKLLCSFGGKILPRPSDARLRYVGGETRIISIRKDISWDELVKKTLGICRQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGIEMHEGSQRLRIFLVPLVESEETPSTEVSTVQQSDPDYQYVVAVNGMVDPSPRKSIGGQSLNNEASPLETSMNFAPAFPEISPTSSSLLEIRDDINALNADGILNDSLNLQRSPPMSPIPVQASGSSTGYVQLVGNNSCQGSIDSNASFVTAQLPPENPSISTGDHRYPQQVAFTLLSDSHPYEHGDVGQPKKLNGQHFGHYNAGKEFVTPVHVDPGDGYSDEFFGERLLHKEKRFYPGNPLSCLGDPICQQAESNGISDSSYGLPHAFSDSQLHESAARSGYCSQEGIGHSFSLNLENAQLSSMVLSNVSQGNLMGVQLDSILHHTQIQRMIPNVDSTELHRRQEMSSSSPYLESLAMNDHVHKDSFSTEKRYPIAQTGLSGSSFVAKDIQDNSEKLEKMKIEQNNPVLSKDSKVYEEKSAIIDMGNVTESHLLDSLPANNLNTKINVQKNLGIASEDRIPASSGMVEVSSYNVVDKIPSDLPEMSQRTRDCKKCALAEGLNSEQDIEFSLTRCFDLNAPLKCEESYCDKTSLGDNLFELSINPASLKSTQIQLPENQLATGFPENPGQNISFNKEPMLDELFTGTDQMVGQFSVEHTASGKPKVEDVMSGQSKNIQRYNAANRVEPFVMVEDVTRVVPPDIETSFVPTPHIVDEVGSDAVSPSHMEEESILPESEPEDTIDDQADKNEFLCDAMIAEMEASLYGLQIIRNADLEELLELGSGTYGTVYHGKWRGTDVAIKRIKKSCFSGRSSEQEHLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSQVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPQWRKLMEECWSADPVSRPSFTEITNRLRSMSVALQAKGNCQTRQLRPGSAS* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1366 1279 SUPERFAMILY Protein kinase-like (PK-like) 982 1254 IPR011009 -
Dod01g1366 1279 MobiDBLite consensus disorder prediction 167 183 - -
Dod01g1366 1279 Pfam PB1 domain 209 293 IPR000270 GO:0005515
Dod01g1366 1279 SMART serkin_6 992 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1366 1279 PRINTS Tyrosine kinase catalytic domain signature 1111 1129 IPR001245 GO:0004672|GO:0006468
Dod01g1366 1279 PRINTS Tyrosine kinase catalytic domain signature 1074 1087 IPR001245 GO:0004672|GO:0006468
Dod01g1366 1279 PRINTS Tyrosine kinase catalytic domain signature 1182 1204 IPR001245 GO:0004672|GO:0006468
Dod01g1366 1279 PRINTS Tyrosine kinase catalytic domain signature 1226 1248 IPR001245 GO:0004672|GO:0006468
Dod01g1366 1279 Pfam Protein tyrosine and serine/threonine kinase 996 1255 IPR001245 GO:0004672|GO:0006468
Dod01g1366 1279 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 117 1269 - -
Dod01g1366 1279 Gene3D Transferase(Phosphotransferase) domain 1 1080 1274 - -
Dod01g1366 1279 PANTHER SERINE-THREONINE PROTEIN KINASE 117 1269 - -
Dod01g1366 1279 SMART PB1_new 207 294 IPR000270 GO:0005515
Dod01g1366 1279 Gene3D - 213 293 - -
Dod01g1366 1279 ProSiteProfiles Protein kinase domain profile. 992 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1366 1279 ProSitePatterns Protein kinases ATP-binding region signature. 998 1023 IPR017441 GO:0005524
Dod01g1366 1279 MobiDBLite consensus disorder prediction 938 959 - -
Dod01g1366 1279 CDD STKc_MAP3K-like 998 1255 - -
Dod01g1366 1279 CDD PB1_UP2 196 291 - -
Dod01g1366 1279 MobiDBLite consensus disorder prediction 158 186 - -
Dod01g1366 1279 MobiDBLite consensus disorder prediction 1 24 - -
Dod01g1366 1279 SUPERFAMILY CAD & PB1 domains 209 293 - -
Dod01g1366 1279 Gene3D Phosphorylase Kinase; domain 1 985 1079 - -
Dod01g1366 1279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1117 1129 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1366 Dod-Chr1 29541584 29550500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1366 191 324 MAP Kinase Kinase Kinase AT1G16270 61.029 6.47e-41 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dod01g1366 PK_Tyr_Ser-Thr 4.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1366 - - gmx:100790135 1674.06