Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1351 ATGGAGTGTGAAGTTGAACCGCAAGGTGGTGATCTGCATGCAAGGGTTGCAGCAACTACTGAGGCAGACCCTATTGTTGGTTTTGGCACCATGGACCATCATGGCACACAGACTTTGGCATCAGTTGCTGAGAGAGAGATGTGGCTCAACACTGGTGACCAAGAGGATCTCTTGGGTGTGAACGATGCCTCCATGTTCTATGCTGAGTTCCCTCCTCTCCCAGATTTCCCATGCATGTCATCATCTTCCTCTTCATCCTCAACACCAGCACTTCCACTGAACAACATAGCAAGCTCCACCTCAACCTCTTCCTCTTCTTCCTCTTCTGCTGCTTCATGGGCTGTTCTGAAACCAGATGGTGAGGAAGATGTGGACAGGAACAGCATCAACCTTTACATGCAGCATCAGCATCAGCAGAATAATAATGATCCACTGGATCATGCAACAACACCTGTTGCTGCCTTGTCCTCTACTGCTTCCATGGAGATTTCTCAGCAGAACCTTGATCAACCTGGTTTCAACGGTGTTGGTGATTGCATGGATGATGTGATGGACACTTTTGGGTACATGGAGCTCTTAGGACCCGGTGATTTATTTGACCCTTCATCTATTTTCCAGGGCGATGAGAACCCCTTCGGGGAATTCACACAGGAACAGATGCCGCAGCAAGAAGTAGAACACCAGCATGCAATAGTGGCAACTCAGTTACAGGAACCTACAGTACTACCTCAGCAAGGGGCAGAGGAAGGTGATCATCATCATCATCAGGCTCTTGGTGTGTGTGGCACAACCACTAACAATGATGAAGAGATCATCCAAGGAGAGGAAGGTGGTGCTGGTAATGGTGATGGTGATGGTGATGGTGGTGGTGCAGGTGCAGATGATGAAATGAGCATGGTGTTCTTAGAATGGCTCAAGTCCAACAAGGAGAGCGTTTCTGCTACTGACTTGAGGAGCGTCAAGCTCAAGAAGGCCACAATAGAGAGTGCTGCAAGGCGTTTGGGTGGAGGAAAAGAGGCCATGAAGCAGTTGCTGAAGCTGATTCTTGAATGGGTGCAAACCAGCCATCTTCAGAATAAAAGGCGCAAGGAGAACCATAACATCAGTAACACACCTTCAAACCCTCTCTCACAGTTTCAGGATCATAGTCAAAACCAGAACACAAACACTGGTTCCAATCTCAACCCAAATTCATTTGGACCTGAACCAAACACCTGTTTCAACCAGACACCATGGATGTCCCCTCCACATCATTATGGGACAGATCAAACTCCTTTAATGGCGGCTCCGCCGCAAACATTTCAACAGCCTTCCATGGTTGGCTATGTGGGAGATCCCTACACAAACGGTGCTGCTACAAACAACATCAATGGTGGTCCTAACCATAATAGCAATTTTCAGCCTGCTACTGAATACCACATGCTGGAATCAGCAAGCTCATGGCCTCCTTCTCAGTACACTGTTGCCCCTAACTATAGCCAGCCATTTGGGGACAATAGTCTTCACCCACCCGGGGCACCAGGTGCGGCGTTCGGCAGCGGCTACGGGAATCAGTACCCTTATCAGTTTTACCATGGCCCTGGTGATGGGTTGATGAGATTAGGCCCCTCAGCTACAAAAGAAGCAAGGAAGAAGAGGATGGCAAGGCAGAGAAGGTTTTCAGCTCATCCCAGGCATCACAGTCACCACCAGAATCAAGCTTCTGACCCACAAGCAAGATTGGGTGGGGACAATTGTACCAGTGTTGTGGCTGTAACTCATGCAAATCCAGCCAATTGGGTGTATTGGCAGACTTTGGCTGGTGGGACCCCTTCCATGGCACCGGTGACTCCAGCCGAGCCGCCGGCAGGACACCAGATGCTGGATCGGAATGCCATGCAGACACAGAATTATCATCAGTGTCGAGTCTCATCTGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTACAAAAGGTTTTGAAGCAAAGCGATGTGGGAAGTTTGGGGAGAATAGTTTTGCCAAAGAAAGAGGCAGAAACTCATTTGCCAGAACTGGAGGCAAGAGATGGAATTTCAATAACAATGGAAGACATTGGAACCTCTCGTGTTTGGAATATGCGCTACAGATACTGGCCAAACAACAAAAGCAGGATGTACTTGCTAGAGAACACTGGGGACTTTGTGAGAGCCAATGGACTCCAAGAAGGAGATTTTATAGTGATATACTCAGATGTGAAGTGTGGAAAATTTATGATAAGAGGAGTTAAGGTGAGGCAACAAGGGGCAAAACCAGAGACCAAGAAAGCAGGAAAATCGCAGAAAAACCAGCATGGGAACAATGCGGCAACTACAGCTGGTACAGCTACTAATAATGGCACGTCATCTTCAACTCAGCAGAAAAATGAAAAAGTAGCCAACTAA 2415 0.4799 MECEVEPQGGDLHARVAATTEADPIVGFGTMDHHGTQTLASVAEREMWLNTGDQEDLLGVNDASMFYAEFPPLPDFPCMSSSSSSSSTPALPLNNIASSTSTSSSSSSSAASWAVLKPDGEEDVDRNSINLYMQHQHQQNNNDPLDHATTPVAALSSTASMEISQQNLDQPGFNGVGDCMDDVMDTFGYMELLGPGDLFDPSSIFQGDENPFGEFTQEQMPQQEVEHQHAIVATQLQEPTVLPQQGAEEGDHHHHQALGVCGTTTNNDEEIIQGEEGGAGNGDGDGDGGGAGADDEMSMVFLEWLKSNKESVSATDLRSVKLKKATIESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENHNISNTPSNPLSQFQDHSQNQNTNTGSNLNPNSFGPEPNTCFNQTPWMSPPHHYGTDQTPLMAAPPQTFQQPSMVGYVGDPYTNGAATNNINGGPNHNSNFQPATEYHMLESASSWPPSQYTVAPNYSQPFGDNSLHPPGAPGAAFGSGYGNQYPYQFYHGPGDGLMRLGPSATKEARKKRMARQRRFSAHPRHHSHHQNQASDPQARLGGDNCTSVVAVTHANPANWVYWQTLAGGTPSMAPVTPAEPPAGHQMLDRNAMQTQNYHQCRVSSDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGAKPETKKAGKSQKNQHGNNAATTAGTATNNGTSSSTQQKNEKVAN* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1351 804 MobiDBLite consensus disorder prediction 539 575 - -
Dod01g1351 804 MobiDBLite consensus disorder prediction 544 561 - -
Dod01g1351 804 MobiDBLite consensus disorder prediction 756 804 - -
Dod01g1351 804 Pfam B3 DNA binding domain 655 751 IPR003340 GO:0003677
Dod01g1351 804 MobiDBLite consensus disorder prediction 368 417 - -
Dod01g1351 804 MobiDBLite consensus disorder prediction 358 424 - -
Dod01g1351 804 SUPERFAMILY DNA-binding pseudobarrel domain 653 749 IPR015300 -
Dod01g1351 804 SMART B3_2 654 754 IPR003340 GO:0003677
Dod01g1351 804 MobiDBLite consensus disorder prediction 272 294 - -
Dod01g1351 804 MobiDBLite consensus disorder prediction 771 804 - -
Dod01g1351 804 CDD BfiI_C_EcoRII_N_B3 652 753 - -
Dod01g1351 804 ProSiteProfiles B3 DNA-binding domain profile. 654 756 IPR003340 GO:0003677
Dod01g1351 804 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 41 800 IPR044800 GO:0003700
Dod01g1351 804 Gene3D - 650 770 IPR015300 -
Dod01g1351 804 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 41 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1351 Dod-Chr1 29003531 29008704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1351 45 787 B3 DNA Binding Superfamily AT3G24650 43.862 4.41e-156 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod01g1351 B3 3.8e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1351 - - gmx:100795226 920.998