Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1345 ATGGCAACAGCAACGTACCCACCACCACCACCATATTATAGGCTCTACAAAGATTACTTGGAGGATCCTAAGTCTGCTCCGGAGCCTCCTCCCCCTATAGAAGGGACCTATGTTTGTTTTGGGGGCAATTACACTACAAGTGACATTTTACCTACCTTGGAAGAACAGGGGGTGCGCCAACTCTATCCTAAGGGGCCTAACATTGATTTCAAGAAGGAGCTGAGATCACTGAATGGAGAATTGCAGCTACACGTTTTGGAGCTTGCTGATATTCTTATTGAGAGACCATCACAGTATGCGAGGAGAGTTGAAGAAATTTCGACTATATTCAAAAACTTACATCACCTTTTAAATTCACTACGTCCCCATCAGGCGAGAGCAACATTAATTCACATTTTGGAACTTCAGATTCAGTGCCGTAAAGAAGCAGTGGAGGACATAAAGAGGAGGAGAGAAGAGGCACGAAGAATACTTAACGAGTCTCTGGTGACACTTGATGGCCATCAGCTTGGAATTCAAGTCACTAGAAAGGCCCAAATCAAGGAGGAGCAATCCGTCAGATCCCTAGCCAAGTACATCACCGTTTGGCTCAAGTTCCTCTTCCAGAAACTAGCCTCCTGCAGCTGCGACTTAAACATTGTTGGTGTCCTGGTCAGAGACAGAGGTTTCGCCACTCCGGCCGCCAGGGGGATGAGGGATAATGGACCTAGGATGTGGGGGGACTAA 726 0.4697 MATATYPPPPPYYRLYKDYLEDPKSAPEPPPPIEGTYVCFGGNYTTSDILPTLEEQGVRQLYPKGPNIDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTIFKNLHHLLNSLRPHQARATLIHILELQIQCRKEAVEDIKRRREEARRILNESLVTLDGHQLGIQVTRKAQIKEEQSVRSLAKYITVWLKFLFQKLASCSCDLNIVGVLVRDRGFATPAARGMRDNGPRMWGD* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1345 241 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Dod01g1345 241 Gene3D - 63 159 IPR044888 -
Dod01g1345 241 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Dod01g1345 241 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 187 IPR009244 GO:0003712|GO:0006357|GO:0016592
Dod01g1345 241 Coils Coil 140 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1345 Dod-Chr1 28685071 28695179 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Dod01g1345 Med7 1.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1345 K15148 - gmx:100792250 300.441