Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1333 ATGTCCCCAGCAGGAGGCTCATCAAGATGGAGCCCCACCACTGAGCAGCTCATGATCCTGGAGGAACTGTACAGGAGTGGGATTAGAACTCCTAGTGCATCCCAAATTCAGCAAATAACAACACACCTTTCTTTCTATGGAAGGATAGAAGGGAAAAATGTTTTCTATTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTAAGGAGGAAACTCAACAAGCAACTGCAGCTACAGCAACAACTCCAACTCCATCATTACCAACTGAATCAGGATACCAGCAACCGTTTTGTTGGTAGCTTTGGCTATCCTCCTCCTTCTAGTAACAAAGAAGTTTCCTTTCACAACACACCTGGCTTGTTTTTTCAGGGAGGAGCTGCAAACACATCAGATCAAGGGTCAATGAATTGCAAATGGAGTGTGTATAACCCGCAGGGTTTAGTGGAGAAGAACGGGGTGACATTCTGCAACTATGGTTGTGCACTCGAGGATGTTAATCAAGCATCCTCATGTTGCACTCGACCTCTCAAGACTCTTGATCTCTTCCCAATCACAACTTCCAGAATCAAAGAGGATTGCACCACATCATCTAATTAA 600 0.4483 MSPAGGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQLHHYQLNQDTSNRFVGSFGYPPPSSNKEVSFHNTPGLFFQGGAANTSDQGSMNCKWSVYNPQGLVEKNGVTFCNYGCALEDVNQASSCCTRPLKTLDLFPITTSRIKEDCTTSSN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1333 199 Pfam Homeodomain 8 67 IPR001356 GO:0003677
Dod01g1333 199 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 197 - -
Dod01g1333 199 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 197 IPR044555 GO:0003700|GO:0099402
Dod01g1333 199 SMART HOX_1 5 72 IPR001356 GO:0003677
Dod01g1333 199 SUPERFAMILY Homeodomain-like 8 67 IPR009057 -
Dod01g1333 199 ProSiteProfiles 'Homeobox' domain profile. 3 68 IPR001356 GO:0003677
Dod01g1333 199 Gene3D - 3 68 - -
Dod01g1333 199 CDD homeodomain 9 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1333 Dod-Chr1 28364001 28364925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1333 1 75 Wox Gene Family AT2G28610 82.667 9.94e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod01g1333 Homeodomain 6.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1333 - - gmx:102663963 251.906