Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1332 ATGGGCCAAGAAGGAATACGCAATCGCGTCCGTCGCATTGGCCTTCACTCTCATCCTCTTCTCCCTATCTACCCGCCCCAACCTCCAGCCTTCCAGAATCTCCTCCGATTCCGCCGCCGTCGTTCCATTGACCCTCCTCAGAAAAGCCAACCAAAGAGGCGCACGTACGTTTCCCCAGAAAATAAATGCACTGACCCCATGGCTCAAAACGCGTCCAAGTATTGTGACTTGACTTCGTCGCGTAACTCGAGCTTTTTCCCTTTTGCAGTTTGCTTGGATGGGAGCGCCCCTGGCTACCACTTTCAGAAGGGCTTCGGATCCGGATCCCACAGCTGGCTGCTACACGTTGAGGGAGGAGGGTGGTGCAATTCGATATTGTCATGCTCTCAGCGGAAAATGACTGCTTTGGGGTCGTCCAAGTACATGGAAACGGAGGTTCTTTTCTCAGGAATATTAAGCTCTGATCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCCAGCCACCCAGAAAATGAGATTAAGAAAGGTAGTGGGTTGTTCTTCAGAGGCCAGATCATTTGGGAAGCTATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTTCTTTCAGGGTGCTCTGCTGGAGGTTTGGCAACTCTTATACATTGTGATGACTTTCGAAAACTTTTTCCAGAGGAGACAACTGTTAAATGTCTTGCTGATGCAGGCTTCTTCCTGAATGAGAAGGATATTCAAGGAAATAGCACAATGAGATCTTTCTACCGTGATGTTGTTCAGCTTCAGGGTGTTGCAAAAAGTTTAAACAAAGATTGCATTGCTAGAATCGAACCATATAAGTGTATCTTTCCATTAGAAATTGTTAAAAGCATAAAGACACCAGTGTTTTTTGTCCACCCAGCTTATGATTTCTGGCAGATACAAAATATCTTGGTACCTCATGGTTCAGATCCTGATGGTCACTGGAAAAGCTGCAGATTGAACCTTGGTGATTGTAATGCTAACCAATTTGATGTACTTCACCATTTCCGTAGTTCATTGCTGATGGCCGTGAATGAATTCCAGCAACGAAAGGAGATTGGAATGTTCATAAATTCCTGCTTTATTCATTGCCAGACTTGGATGGGAGAGACATGGCACTCCCCCAGTTCCCCTAAAATAAATGATAAGGTTTACATTCTAGTTTTTCTGCAACCTGACTTTTCTTTTGGCTGCCCTTCTATGTTGTTGCCCTTGGAGCAGACGATTGCTGAATCTGTTGCTGATTGGTACTTTGACCGAAAAGTTGTGAAGCAACTTGACTGCCCTTATCCATGCAACCCGACTTGCCATAATAAAGATTTCACCAGAATATAG 1407 0.4449 MGQEGIRNRVRRIGLHSHPLLPIYPPQPPAFQNLLRFRRRRSIDPPQKSQPKRRTYVSPENKCTDPMAQNASKYCDLTSSRNSSFFPFAVCLDGSAPGYHFQKGFGSGSHSWLLHVEGGGWCNSILSCSQRKMTALGSSKYMETEVLFSGILSSDPSQNPDFFNWNKVKIRYCDGASFASHPENEIKKGSGLFFRGQIIWEAIMDELLSIGMSKAKQALLSGCSAGGLATLIHCDDFRKLFPEETTVKCLADAGFFLNEKDIQGNSTMRSFYRDVVQLQGVAKSLNKDCIARIEPYKCIFPLEIVKSIKTPVFFVHPAYDFWQIQNILVPHGSDPDGHWKSCRLNLGDCNANQFDVLHHFRSSLLMAVNEFQQRKEIGMFINSCFIHCQTWMGETWHSPSSPKINDKVYILVFLQPDFSFGCPSMLLPLEQTIAESVADWYFDRKVVKQLDCPYPCNPTCHNKDFTRI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1332 468 PANTHER PECTIN ACETYLESTERASE 4 69 461 - -
Dod01g1332 468 PANTHER NOTUM-RELATED 69 461 IPR004963 GO:0016787
Dod01g1332 468 MobiDBLite consensus disorder prediction 41 61 - -
Dod01g1332 468 Pfam Pectinacetylesterase 89 408 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1332 Dod-Chr1 28342215 28350023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1332 89 408 Carbohydrate Esterase AT3G09410 65.625 1.85e-163 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1332 K19882 - qsu:111992987 592.808