Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1314 ATGATACTTGGAATCTTCAGTGGCTGCAATGCCACGGTGTTTGCTTATGGGGCTACTGGAAGTGGGAAGACATACACCATGCAGGGGAATGAGGAACAACCTGGCTTGATGACAATGGCAATGGCCAAGATACTGTCTATTTGCCAAAGCACTGGCAGCACAGCACAGATTTCATACTATGAAGTCTACATGGACAGATGTTATGACCTCTTGGAGGTCAAAGTAAAGGAGATTTCGATTTGGGATGACAAAGATGGGCAAATCCACCTCCGTGGACTTTCTCAGGTTCCTATCAACACAATGTCTGAATTTCAGGAGGTTTTCTCCTGCGGTGTTCAGAGGCGTAAAGTCGCACACACAGGCCTCAATGATGTCTCCAGCAGAAGCCATGGAGTCCTTGTGATATCTGTCTCCACTCCTTCTGCTGATGGCACTAGAGCTGCTGTATTTGGAAAGTTGAACCTCATAGACTTGGCAGGTAATGAAGACAATAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGGCAAGATAAACCAGTCGTTGTTTGCATTGTCAAATGTGATATATGCATTGAACAACAACAAACCACGAGTGCCCTTCCGAGAAAGCAAATTGACCCGCATATTGCAAGACTCTTTAGGGGGAACTAGTCGTGCACTGATGGTTGCTTGCCTGAATCCAGGAGAATACCTGGAATCTGTTCATACTGTTAGTTTGGCTGCAAGATCGAGGCACATCTCTAATTTCGTGCCCTCAGCTCATAAACAAGAGACTCCAAAAGCTAAAGTTGACATGGAAGCCAAATTGAGAGCATGGCTTGAATCAAAAGGCAAAACAAAGAGCTCACAAAGACTTGGAGCATTCAATACTCCACTGTCAAGAAAAACTCCCAATTCCATCACTATGTCTGCTAAGAGATGTGTCACTTTTAATAGTTCAGTGAAGGGGGGAAGAACTGGCATCAATGAAGATGCTCAACATACAAAAGAAAGGGCCTTTGCTGTGGCTTTTGGAAATTTACTGGATGGTGAAGGTCCTTTTGAAACGTGCATGGAGAACTTAATTTGTGGTGTTAAAAATAATAAAGATGAGACTGAAATTGATGCCAATAAGTGTGCATGGGAATCATCTGAGTATCTCCCTGCTGAGCCTTTCGGCCAGGGGGTGAACTCATCAGTTACATATAAGAGTAAAGACGCAGTACAAAGTCCTTTAAGAAAACCCCTCTCCCCCATGAATATCAATGTTAATCAAAAGCAGCTTGAGGCATTGTCTTTCACACAAACACCCTTTATTGTAAGCTGCTCCCCTAACAAATGGACACAAAAGAATGACACTCCACTAGACAAATTCAGTACACGAAGTTCTGCATTGAAGAACTGTCTAGTTCAAGAATACATCAATTTCTTGAATAATGCGAGCAGAGAGGAGCTACTAGAGTTAAAGGGCATAGGAGAGAAAATGGCAGAATACATAATAGACCTTAGGGAAGAAAGCCCACTACAATCGTTAAGTGATTTGGAGAAGATTGGCCTCTCCTCCAAGCAGGCCCATAACCTATTCACTAGAGCCGCAACAAACCTATTTGAAGATAAAACAGAAGATTCAATACTCAGTTGA 1629 0.4309 MILGIFSGCNATVFAYGATGSGKTYTMQGNEEQPGLMTMAMAKILSICQSTGSTAQISYYEVYMDRCYDLLEVKVKEISIWDDKDGQIHLRGLSQVPINTMSEFQEVFSCGVQRRKVAHTGLNDVSSRSHGVLVISVSTPSADGTRAAVFGKLNLIDLAGNEDNRRTCNEGIRLQESGKINQSLFALSNVIYALNNNKPRVPFRESKLTRILQDSLGGTSRALMVACLNPGEYLESVHTVSLAARSRHISNFVPSAHKQETPKAKVDMEAKLRAWLESKGKTKSSQRLGAFNTPLSRKTPNSITMSAKRCVTFNSSVKGGRTGINEDAQHTKERAFAVAFGNLLDGEGPFETCMENLICGVKNNKDETEIDANKCAWESSEYLPAEPFGQGVNSSVTYKSKDAVQSPLRKPLSPMNINVNQKQLEALSFTQTPFIVSCSPNKWTQKNDTPLDKFSTRSSALKNCLVQEYINFLNNASREELLELKGIGEKMAEYIIDLREESPLQSLSDLEKIGLSSKQAHNLFTRAATNLFEDKTEDSILS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1314 542 ProSitePatterns Kinesin motor domain signature. 151 162 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dod01g1314 542 ProSiteProfiles Kinesin motor domain profile. 1 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 PRINTS Kinesin heavy chain signature 201 222 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 PRINTS Kinesin heavy chain signature 120 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 PRINTS Kinesin heavy chain signature 152 170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 PRINTS Kinesin heavy chain signature 8 29 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 PANTHER BNACNNG40390D PROTEIN 1 540 - -
Dod01g1314 542 Pfam Kinesin motor domain 2 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 Gene3D Kinesin motor domain 1 290 IPR036961 -
Dod01g1314 542 SUPERFAMILY RuvA domain 2-like 467 514 IPR010994 -
Dod01g1314 542 SMART kinesin_4 1 257 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod01g1314 542 Gene3D - 459 530 - -
Dod01g1314 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 278 IPR027417 -
Dod01g1314 542 Pfam Helix-hairpin-helix motif 471 495 IPR000445 GO:0003677
Dod01g1314 542 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1314 Dod-Chr1 28105165 28110035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1314 1 298 Calmodulin-binding Proteins AT5G65930 34.091 1.11e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1314 K10403 - gmx:100804591 875.93