Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1313 ATGGTAGCTTATTTCCTTTATAGCTTGGAAACTGCATTCGTTTTGAATTTTTGCTGTGATCTTCATGCATTGATTTTTCCATTGCGTGAATATTTGCTGTATAGGAGGACCACTGGCCCTATAAGGCGTGCAAAGGGAGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTGCGACTTTCAAGGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTCCCGGACAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAAGGACCTTGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGTCAAAATATGGGCCTACAAAATGGTCTCTGATAGCTAAGTCTTTGCCTGGTCGAATAGGGAAACAGTGCCGAGAGAGGTGGCACAATCATCTTAATCCTGACATAAAGAAAGATGCCTGGACTTTGGAGGAAGAATTGGCTCTGATGCATGCTCACCATGTACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCCGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTGGCTACGGGAAAACTTCCGCCGATACCAAAGAGCAGCTCTCAAGTTGCAGTCAAAGATACAATTAGACGTTCTGCTACTAAAACAATACTTGTTTGTTCAAATAAAGAATTAAATGTAGCTGTTGAAACATCATCTGAAACTACAGCCATTAGTAAGCTAGATGAGAGTGGAAAGAATCGGTTATCCTCAGGAACAGTTAGAGAAGTTGGTGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGACTGTGTAGAATGCAAGCCTGGATCATCCAACATTGATCTCAGCTGTAGCAACTCAGAACCACTGTCAAGAGCAAAATTTGGAATAACTTGTGGGACAAATTTTCAGAATTCTGGACTCAATGGAAATTCAACAATGGAGAATTGTGCAAACAATGGTGAAATGAGCAGTAGCAGGTTAATCAGAACATCCTTTTCCATAGAAAGTCCAACCTGTGGTTCTTTGTGTTATGAGCCACCGCAGTTAAATGGCTCAGTTCCTTTAGATTCTCTTTATTTAAATATTGTTGGCCTGCAGAATGATTACTGCACTAATCCAATATTGTCTCCTGTTGGTTTCTTCACTCCACCTAGTGTGAAGGGTAGTGAATTATGCATAGAGTCACCTGAATCAATTTTGAAAAAGGCTGCTAATACTTTTCCAAATACTCCTTCTATATTGAGGAGGAGACGGAATGGAGTCCACACGCACACTACTCCTAGTAAAATTTTGAGGGTGGATAATTTATCAACTTCTAATGAACCAGAGAGAAGCACGGATAACTCTAGTTCTGAAGTTGGGAGGTTCTATGAGACTCCAGCAAGCCATGACAATGAGAGTGACATTCCCAGGGCATTCAATGCATCTCCACCATACCGGTTAAGATCCAAGAGGACAGCGGTTCTGAAGTCTGTGGAGAAACAACTTGAGTTTGCATTTGACAAAGAAAAGAATGATGGTAATGTCAACTCGATGGAAAAATCTGCAAAGCAGAGCAATGTGATGAATGAAGATTGTCTGCATGAAACAAAATTGGTGGTGACATAG 1662 0.4067 MVAYFLYSLETAFVLNFCCDLHALIFPLREYLLYRRTTGPIRRAKGGWTAQEDETLRNAVATFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMHAHHVHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGKLPPIPKSSSQVAVKDTIRRSATKTILVCSNKELNVAVETSSETTAISKLDESGKNRLSSGTVREVGDSSSVPANESADSDCVECKPGSSNIDLSCSNSEPLSRAKFGITCGTNFQNSGLNGNSTMENCANNGEMSSSRLIRTSFSIESPTCGSLCYEPPQLNGSVPLDSLYLNIVGLQNDYCTNPILSPVGFFTPPSVKGSELCIESPESILKKAANTFPNTPSILRRRRNGVHTHTTPSKILRVDNLSTSNEPERSTDNSSSEVGRFYETPASHDNESDIPRAFNASPPYRLRSKRTAVLKSVEKQLEFAFDKEKNDGNVNSMEKSAKQSNVMNEDCLHETKLVVT* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1313 553 MobiDBLite consensus disorder prediction 258 282 - -
Dod01g1313 553 ProSiteProfiles Myb-like domain profile. 92 143 IPR001005 -
Dod01g1313 553 SUPERFAMILY Homeodomain-like 94 190 IPR009057 -
Dod01g1313 553 MobiDBLite consensus disorder prediction 452 494 - -
Dod01g1313 553 PANTHER MYB PROTEIN-RELATED 33 467 - -
Dod01g1313 553 Gene3D - 150 224 - -
Dod01g1313 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 198 IPR017930 -
Dod01g1313 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 147 IPR017930 -
Dod01g1313 553 MobiDBLite consensus disorder prediction 452 474 - -
Dod01g1313 553 Gene3D - 44 96 - -
Dod01g1313 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 91 IPR017930 -
Dod01g1313 553 ProSiteProfiles Myb-like domain profile. 144 194 IPR001005 -
Dod01g1313 553 CDD SANT 48 91 IPR001005 -
Dod01g1313 553 CDD SANT 151 194 IPR001005 -
Dod01g1313 553 ProSiteProfiles Myb-like domain profile. 40 91 IPR001005 -
Dod01g1313 553 SMART sant 44 93 IPR001005 -
Dod01g1313 553 SMART sant 96 145 IPR001005 -
Dod01g1313 553 SMART sant 148 196 IPR001005 -
Dod01g1313 553 PANTHER MYB-RELATED PROTEIN B-LIKE 33 467 - -
Dod01g1313 553 CDD SANT 99 143 IPR001005 -
Dod01g1313 553 SUPERFAMILY Homeodomain-like 46 107 IPR009057 -
Dod01g1313 553 Pfam Myb-like DNA-binding domain 149 192 IPR001005 -
Dod01g1313 553 Pfam Myb-like DNA-binding domain 45 91 IPR001005 -
Dod01g1313 553 Pfam Myb-like DNA-binding domain 97 143 IPR001005 -
Dod01g1313 553 Gene3D - 97 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1313 Dod-Chr1 28047043 28053621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1313 32 526 MYB Transcription Factor Family AT5G02320 50.784 2.70e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod01g1313 Myb_DNA-bind_6 4.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1313 K09422 - gmx:778081 841.262