Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1307 ATGGGTGCTTGTTGGAGCAACCGGATTAAGGCTGTGAGTCCTTCCAATACAGGGTTCACTTCCAGAAGTGTAAGCAGGAATGGCTATGACATCAGCTCAAGTAGCAGGAACTCATCTTCCTCCATACCCATTGCACCTCGAAGCGAGGGCCAGATCTTACAATCTTCAAATTTGAGAAGCTTCAGCTACAATGATCTAAGAGCTGCCACTAAAAATTTCCGCCCAGACAGCGTCTTAGGGGAGGGCGGGTTTGGTTCAGTTTATAAGGGCTGGATTGATGAGCATTCACTAGTTGCTACCAAACCGGGGATAGGCATGACTATTGCTGTGAAGAGGCTTAACCAAGATGGGTGCCAGGGTCACAAGGAATGGTTGGCTGAAATAAATTATCTTGGGCAACTGCATCATCCTAATCTTGTCAAGTTGATTGGATACTGTTTGGAGGATGAGCATCGGCTTCTTGTTTATGAATTTATGTCAAAGGGTAGCGTGGAGAATCATCTGTTCAGAAGAGGTTCTTATTTTCAGCCACTCTCTTGGAATTTGCGGTTGAAAATAGCCCTTGGGGCTGCAAGGGGTCTTGCTTTTCTCCATAGTACAGAAGTGAAAGTCATATACCGTGACTTTAAGACTTCTAATATCCTTCTTGATACTAATTTCAATGCCAAACTTTCTGATTTTGGATTGGCTAGAGATGGTCCAACTGGTGATAAAAGCTATGTCTCTACTAGGGTCATGGGAACCCGTGGATATGCAGCACCAGAGTATCTTGCAACAGGTCATCTCACTGCCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCTATTGACAAGAACCAGCCATCTGGAGAACATAACCTGGTTGACTGGGCCAGGCCTTATCTATCTAACAAACGCAGAGTTTTTCGTGTTATGGATCCCCGTCTTGACGGTCAATACTCCCCAAGTCGAGCTCAAGCAGCAGCTGCCCTTGCTTGGCAATGTCTTGCTGCCGAGCCCAGGTCCAGGCCAAATATGGATGAGGTGGTAAGAGCATTGGAGCAGCTTCAGGAATCGAAAGACTCGCACAAAAAAAGTGCTGATCCGAAAGAACATCGAGCACGTGGACATGGCCTTGGCCATTCGAATGGCCATCCTGCACCTGGCAAAGGTAGTGCAGATGCTCCCAGAAAGGCTCCTGCTTATCCCAGGCCGTCTGCTGCTCTTCTTCTTTGA 1242 0.4678 MGACWSNRIKAVSPSNTGFTSRSVSRNGYDISSSSRNSSSSIPIAPRSEGQILQSSNLRSFSYNDLRAATKNFRPDSVLGEGGFGSVYKGWIDEHSLVATKPGIGMTIAVKRLNQDGCQGHKEWLAEINYLGQLHHPNLVKLIGYCLEDEHRLLVYEFMSKGSVENHLFRRGSYFQPLSWNLRLKIALGAARGLAFLHSTEVKVIYRDFKTSNILLDTNFNAKLSDFGLARDGPTGDKSYVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVDWARPYLSNKRRVFRVMDPRLDGQYSPSRAQAAAALAWQCLAAEPRSRPNMDEVVRALEQLQESKDSHKKSADPKEHRARGHGLGHSNGHPAPGKGSADAPRKAPAYPRPSAALLL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1307 413 MobiDBLite consensus disorder prediction 359 413 - -
Dod01g1307 413 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1307 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1307 413 PANTHER OS01G0588500 PROTEIN-RELATED 22 395 - -
Dod01g1307 413 MobiDBLite consensus disorder prediction 359 380 - -
Dod01g1307 413 PANTHER KINASE 1B 22 395 - -
Dod01g1307 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Dod01g1307 413 Coils Coil 348 368 - -
Dod01g1307 413 Gene3D Transferase(Phosphotransferase) domain 1 159 379 - -
Dod01g1307 413 SUPERFAMILY Protein kinase-like (PK-like) 51 357 IPR011009 -
Dod01g1307 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Dod01g1307 413 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Dod01g1307 413 MobiDBLite consensus disorder prediction 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1307 Dod-Chr1 27853314 27856184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1307 20 355 Glycoside Hydrolase AT3G07070 47.550 8.24e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod01g1307 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1307 - - gmx:100819620 681.404