Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1300 ATGATAATGGATCCACGTTTTCGTGGGTTTAGTGGTTCGACAAATGAAATCCGGTTTGGGAATCAGTCTTTGCCGATTCTGCAGAATCAGGGATTTGAAAATGGCTTCTCTGATCAAAGTAGGGAATTCGGTTACCTTCAGTCCAATCTAATAGCTGCTAACACTACACCTTCATCCTCGAATTTGACACATGAGGAGCCTTCTCCGGAGGACTGTGATTTTTCTGATGCAGTTTTGGGTTACATCAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGCTTCAGGATTCTTTGGATCTTCAAGTTGCTGAGAGATCATTCTATGAGGTGATCAGCGAAAAGTACCCGCCTCTGCCGTTAGGAAATCCTAGTCTTATTAATCCCAAGGATGGGGGTGTAGACAATGATTTTTCTGAAAATTATGGTAGTTGTCTTGGTAATAATGATGGTGATCTTAGTAGCATTGTTAATGGCAATTATTTTTGTCTAAACTCCACGGAAGTTCCCCCCCGAAATTTTCAACACAATAGTTTTTCACAATTGTCTTATAGTTCTTCAAATAGTGTGATAACTAGTGTGGAAGGGCCTGTGGATTCTCCAAATAGTATTGTACAGGTCCCTGATCTGAGCAGTGAGAGTCAATCTATTTTGCAATTTCAGAAGGGCGTTGAGGAGGCTAGTAAGTTTCTTCCAAGTGGAAATGAGCTCTTTGCCAATTTGAATGTGGCTAAATTTTCACCACTAGAGCCTAAATTCGGGACTAAAGCATTGCCTGTTAAGGTGGAGAAGTATGAGGGGGAGTCTTTACTTGCTGGATCCAAGGGAAGGAAGCATCTTCACAGGGAAGAGGAAGAGGGAGATGTTGAAGAAAGTAGAAGCGGCAAGCAACCAGCAGTTTACTCAGAACCTACTATTCGGTCGGATATGATTGATATTATCCTTCTTCATAGTGCAGGGGATGGTAAGAAACATTATATGGCTCGTCGTGAGGCTCTACAGAATAAAAACAACAAGGTAGTTTTGTCAAATGGTAAGTTGAAGGCATCCAAAGGTGGAAAGGGACGTGGTAAGAAACAAAATGGGAAAAAGGAAGTGTTTGATTTGAGAACACTTCTGGTTCTTTGTGCACAATCTGTTGCAGCTGATGACTCTAAAAGTGCACATGGGTTGCTAAAGCGTATCAGGCAGCACTCAAGTCCTTTTGGGGATGGCAATCAGAGGTTGGCTCAAATCTTTGCAGATGGCCTTGAGGCACGCTTGGCTGGTACTGGAAGCCAAATATATAAAGGACTTGTTTGCAAAAGAACATCAGCAGCTGATGTTCTTAAAGCTTACCATCTTTACCTGGCTGCTTGCCCTTTTAGGAAGATTTCTAACATGATCTCAAATATCAAAATAAGGATGTCTTCGGCAAACTCAATGAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCCACTTTTATACAGAGGCTTTCATGGAGATCTGGAGGACCACCAAAGCTTCGGATTACGGGAATAGACTTCCCACAGGCTGGTTTCAGGCCAGCAGAGAGAATTATAGAAACAGGACGCCGCCTGGCAGCTTATGCTGAATCTTTCGATGTCCCATTTGAGTATAATGCCATAGCAAAAAAGTGGGAAACAATTCAACTTGAGGAGCTGAAGATTGACAGGGATGAGTACCTTGTTGTTACCTGTTTTTATCGAGGCAGAAACTTGCTTGATGAATCTGTGGTTGTGGACAGTCCAAGGAGTAAAGTCCTCAGTTTGATAAGGAGGATCAACCCGGATCTATTCATTCATGGCATAATTAACGGGGCCTTTAACGCCCCTTTCTTTGTTACTCGATTTAGGGAGGCACTGTTTCACTACTCTTCGCTATTTGATATGCTTGAAACTATTGTGCCTCGCGAAGAGTGGGAGAGGATGCTAATTGAGAAGGAGATATTTGGGAGGGAAGCATTGAATGTTATAGCTTGTGAAGGCTGGGAGAGAGTCGAGAGGCCAGAGACATATAAGCAGTGGCAACTCCGTATACTACGGGCCGGGTTTGTGCAACAGCCTTTTGATCGTAGGATAGTGGAGATGGCAATGGAGAAAGTAAGGTCAAGCTTCCACCCAGATTTTGTAATTGATGAAGATAGCCAGTGGTTGCTACAAGGTTGGAAGGGGCGAACCATTTATGCCCTTTCTTGTTGGAAGCCTGCATGA 2238 0.4303 MIMDPRFRGFSGSTNEIRFGNQSLPILQNQGFENGFSDQSREFGYLQSNLIAANTTPSSSNLTHEEPSPEDCDFSDAVLGYINQILMEEDMEDKTCMLQDSLDLQVAERSFYEVISEKYPPLPLGNPSLINPKDGGVDNDFSENYGSCLGNNDGDLSSIVNGNYFCLNSTEVPPRNFQHNSFSQLSYSSSNSVITSVEGPVDSPNSIVQVPDLSSESQSILQFQKGVEEASKFLPSGNELFANLNVAKFSPLEPKFGTKALPVKVEKYEGESLLAGSKGRKHLHREEEEGDVEESRSGKQPAVYSEPTIRSDMIDIILLHSAGDGKKHYMARREALQNKNNKVVLSNGKLKASKGGKGRGKKQNGKKEVFDLRTLLVLCAQSVAADDSKSAHGLLKRIRQHSSPFGDGNQRLAQIFADGLEARLAGTGSQIYKGLVCKRTSAADVLKAYHLYLAACPFRKISNMISNIKIRMSSANSMRVHVIDFGILYGFQWPTFIQRLSWRSGGPPKLRITGIDFPQAGFRPAERIIETGRRLAAYAESFDVPFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGRNLLDESVVVDSPRSKVLSLIRRINPDLFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREEWERMLIEKEIFGREALNVIACEGWERVERPETYKQWQLRILRAGFVQQPFDRRIVEMAMEKVRSSFHPDFVIDEDSQWLLQGWKGRTIYALSCWKPA* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1300 745 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 744 IPR005202 -
Dod01g1300 745 MobiDBLite consensus disorder prediction 275 305 - -
Dod01g1300 745 ProSiteProfiles GRAS family profile. 363 743 IPR005202 -
Dod01g1300 745 PANTHER SCARECROW-LIKE PROTEIN 9 39 744 - -
Dod01g1300 745 Pfam GRAS domain family 372 743 IPR005202 -
Dod01g1300 745 MobiDBLite consensus disorder prediction 275 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1300 Dod-Chr1 27618437 27622144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1300 70 744 GRAS Transcription Factor Family AT2G37650 54.745 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod01g1300 GRAS 9.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1300 - - ccaj:109816616 1145.95