Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1296 ATGGTTGAGTCAGCCTCAGCAATGTCAAAGACAATGACGGAGGAAGTAATGGCTTCTTGGTCAGATGGGTCAGATGACCTTGTAAGAGAGCTTTTAGATGATGGGTCTCCCCTTCTTATGCTTCCAGAGGAGGCAACTGAAGCCAACACAAGACCTTCTTCAAGTGACCAAACCATTAATAGGTTCATCTCCAACATTTACTCAGGGCCTACCATCACAGATATTGAGAATGCTTTATCGGTGACCAACCAAAGAGAGCATTTCCAACACCTCTCATCAGCAAGGATTTCCATATTGGAAAGGGGTTTAAGTAAAATTGAGAACAAGTACACCCTCAAAATCAAGTGCTTTGGCAATGGAATGGGTGATGATGGATATAAGTGGAGGAAGTATGGGCAAAAATCTATTAAGAATAGCTCAAATCCTAGGAGCTACTACAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCAATGAGGACCCAGACACTCTTATCATCACCTATGAAGGGCTACACTTGCACTTTGCTTACCCATATTTTCTCACGGGACAGCAACAGCAATCTAATGCAGATCCTCCAATCAAGAAGTCCAAGCCTACCTCCCCACAAGACCAACCCCGAGATAACGAAGCCCAATATGTCAATGAAGTCCAACAAATACAAGAAGCCCTTGAAGCCCAAACCAATGCTACTTTAGGCCTGACACCATCAACTCTAATGGACTCTCCAGAAGACATGACCCAAGAAAATTTGGGCTCACAAGGCTTGCTTGAAGACATGGTGCCATTCATTGTTAGGAACCCCACGAACAATGTCAATAGCGCTCACTCAGAATTTTCTTGCTCTTCATGCAGTTCTCCACCAACTTCACCTCCTTCTCTGTGGTCTTCAAATTATTCCTCCTCCTTTTATACCGTTGGCTTAAATTCTACCATGTAG 954 0.4423 MVESASAMSKTMTEEVMASWSDGSDDLVRELLDDGSPLLMLPEEATEANTRPSSSDQTINRFISNIYSGPTITDIENALSVTNQREHFQHLSSARISILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSSNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLTGQQQQSNADPPIKKSKPTSPQDQPRDNEAQYVNEVQQIQEALEAQTNATLGLTPSTLMDSPEDMTQENLGSQGLLEDMVPFIVRNPTNNVNSAHSEFSCSSCSSPPTSPPSLWSSNYSSSFYTVGLNSTM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1296 317 SUPERFAMILY WRKY DNA-binding domain 120 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1296 317 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 19 287 - -
Dod01g1296 317 ProSiteProfiles WRKY domain profile. 117 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1296 317 MobiDBLite consensus disorder prediction 191 213 - -
Dod01g1296 317 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1296 317 Gene3D WRKY domain 118 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1296 317 Coils Coil 215 235 - -
Dod01g1296 317 Pfam WRKY DNA -binding domain 123 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1296 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 287 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1296 Dod-Chr1 27369844 27373481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1296 37 272 WRKY Transcription Factor Family AT5G43290 43.775 1.24e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g1296 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1296 - - gmx:100810459 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1296 01 27369844 27373481 Dod01g1296 01 27369844 27373481 ECH