Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1289 ATGGGGACGAGGAGAGGTGAGATGAAGCTAGAAGAAGATCTGGGTCCTGATCGTGAGGATGACTTCCAAACAGATGATGAAGAAAACCAAGCGGATAGGGTGTTTGAAAATTTGGACGATGATTCTGAGTCAGAATACTCATCTCGTTCACAAAATTTGTCCAATGATAATATCATTCCCTCGTGGCCTCAAAGCTATAGGCAATCTATGGACATGTTAACTAGTGTAACACCACCAAGACTTAGTTTCCTACGGCGAATTGGTTCCTCTGTAACACATAACAATGTCTCTGCAGCATTCAATAGACCTCATCAAGAAGGGCAAGATGATTCCTCCTTGATTATACCTCTTGTTTCTGACGCAAGTTCAGTCCAACAAGAGGAGCCTGCCGCCCCAATAGGCCCTGCAAAATCAATTATATCTAGCTGTACAAAATTTTCTTCTAGTGAATTGCCACCACCTCGGCATCAATGTTCATTTGCACAGGCAGTCGTAAATGGAACCAATATATTGTGTGGGGTAGGAATACTTACCATTCCATATGCAATAAAAGAAGGAGGGTGGTTGAGCCTTATAATCCTTGCAATGTTTTCTATCATTTGCTGTTATACTGGAATCTTGTTGAAAAGATGCTTAGAAACCAACCCTGGACTCAAAACATACCCAGATATTGGTCAGGCTGCTTTTGGAATGGCTGGTCGATTAGGGATTTCGGTAACTTTGTGCGCAGTTGGAGGAATATTTGCTACAATAATGGTCACCTGTTGCTTGTTTTGGGTTGGGATGATAAACCAAGTTGGGTTCAAGCCAGGTGGAAATATTTTAGACCTAGGAAACCTTTCTGTATCAGTTGGTCTCTATGGTTTCTGCTTTGCTGGCCATGCAGTTTTTCCAAACGTCTACTCTTCCATGCGGGAACCATCTAAATTCCCATCAGTTCTATATGTCTGCTTTGCCTTTTGTCTTGTCATGTACATGAGTGTAGGCACAGTTGGCTATTTAACGTTTGGTGACTCGGTTCAGTCTCAATTTACCTTAAACATGCCCAAAGAGTTATATGTATCTAAGATCGCAACCTGGACAACCGTCGTAACACCATTGGCAAAATATGCGCTAACCTTATTACCTATTGCATTGAGCATAGAGGAACTTGCCCCCACTCCCAAGCTAAGAACGCATGCCACAGCTGTTGCTGTGAGAACAGTTTTAGTGATTTCAAGCTTGGTTGTGGCCCTCTGTATTCCTTATTTTGGCTCTTTGATGGCGCTGATTGGTTCTTTCATGTCGATGCTAGTTGCAGTTATTTATCCTTGCGCATGCTATCTCAAGCTACACAGCGGTAGATTATCAAAAGTGGAGATAACAAACTGTGTTTTGATTATTATTGTGGGAACGTTAAGCGCCTTTGTTGGAACATACTCAGCCATTGCAAGACTGATGGATGGTGAGGGGGACTGA 1458 0.4252 MGTRRGEMKLEEDLGPDREDDFQTDDEENQADRVFENLDDDSESEYSSRSQNLSNDNIIPSWPQSYRQSMDMLTSVTPPRLSFLRRIGSSVTHNNVSAAFNRPHQEGQDDSSLIIPLVSDASSVQQEEPAAPIGPAKSIISSCTKFSSSELPPPRHQCSFAQAVVNGTNILCGVGILTIPYAIKEGGWLSLIILAMFSIICCYTGILLKRCLETNPGLKTYPDIGQAAFGMAGRLGISVTLCAVGGIFATIMVTCCLFWVGMINQVGFKPGGNILDLGNLSVSVGLYGFCFAGHAVFPNVYSSMREPSKFPSVLYVCFAFCLVMYMSVGTVGYLTFGDSVQSQFTLNMPKELYVSKIATWTTVVTPLAKYALTLLPIALSIEELAPTPKLRTHATAVAVRTVLVISSLVVALCIPYFGSLMALIGSFMSMLVAVIYPCACYLKLHSGRLSKVEITNCVLIIIVGTLSAFVGTYSAIARLMDGEGD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1289 485 MobiDBLite consensus disorder prediction 1 56 - -
Dod01g1289 485 PANTHER AMINO ACID TRANSPORTER AVT1D 43 242 - -
Dod01g1289 485 MobiDBLite consensus disorder prediction 28 46 - -
Dod01g1289 485 MobiDBLite consensus disorder prediction 1 16 - -
Dod01g1289 485 PANTHER OS05G0424000 PROTEIN-RELATED 43 242 - -
Dod01g1289 485 PANTHER OS05G0424000 PROTEIN-RELATED 242 479 - -
Dod01g1289 485 PANTHER AMINO ACID TRANSPORTER AVT1D 242 479 - -
Dod01g1289 485 Pfam Transmembrane amino acid transporter protein 247 476 IPR013057 -
Dod01g1289 485 Pfam Transmembrane amino acid transporter protein 157 242 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1289 Dod-Chr1 27156721 27160949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1289 8 453 Amino Acid or Auxin Permease AAAP Family AT5G02170 43.513 2.03e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1289 K15015 - qsu:112025453 466.848