Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1279 ATGGTCAGCATATACCAACTGTTATCTTTGTTACTGTTGGTGCTTCTGATCTCAGCTTCATCTGAGCCAGATCAGCTCTTGTATGCTGGGTTTAACGATGTTGGACCCAACAACCTAACCTTAAATGGGGTGGCAGAGATTGAGAAAAATGGTATCCTGAGATTGACAAATGAGACTAGCAGATTAATGGGGCATGCCTTTTATCCATCACCTTTTCAGCTCAAGAACTCCACAACTGGTAAAGCTCTCTCCTTTTCTACCTCATTTGCATTGGCTATTGTCCCTGAGTATCCCAAACTAGGTGGCCATGGCTTGGCTTTCACAATAGCAACATCTAAGGATCTCAAGGCTCACCCTAGCCAGTATCTGGGCCTCCTTAACCCCAGTGATGTTGGTAACTTCTCTAACCACCTCTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGAGTTTGAGGACATCAATGACAACCATGTTGGGATTGACATCAACAGCTTGCAGTCCAATGCATCTGCCCCTGCAGGCTATTACACTGATGGTTCAGGTTCAACCAAAGAGGGTCTCAACATCAAAAGTGGGAAACCGATTATGGTTTGGGTTGATTATGACTCTGCACAGAACCTTGTTAGTGTTACACTTTCCCCGTCTTCTTCCAAGCCCAATAAGCCAATCTTGTCCTTTGTTGTGGATCTCTCACCCATTCTTCATGATACTATGTATGTTGGGTTCTCTTCATCAACGGGTTTGCTTGCTAGCTCCCATTACATCTTGGGGTGGAGCTTCAAAATCGATGGTCCAGCACCACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCAGGACCAAAGAAGAAACACACATCTCTGATAATAGGGGTTTCTGTCTCTCTGTTTGTTGTTGTGTTGTGTGCTGTGGGTATTGGCATTTACCTGTTCAGGAAAATCAAGAACGCTGATGTGATTGAAGCATGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTGAAGAAAGCTACGAAGCGTTTCAAGGACAAAGAGCTACTTGGGCAAGGTGGCTTTGGCAGGGTTTACAAAGGAACATTGCCAAAATCAAAGACACAAGTTGCTGTCAAGAGGGTCTCGCATGAATCAAAGCAGGGCCTGAGGGAATTCGTATCGGAAATCGCCAGCATAGGCCGGCTTCGCCACCGGAATCTGGTTCAGTTGTTGGGATGGTGTCGCCACCGTGGCGACCTCCTGCTTGTGTATGATTTCATGGCCAATGGGAGCTTGGACAAGTACTTGTTTGATGGGCCAAAGACTGTCCTCAGTTGGGAACAAAGGTTCAAGATAATAAAGGGTGTAGCTTCAGCACTATTGTACCTACATGAAGGCTATGAGCAGGTGGTGATACACAGAGATGTGAAGGCTAGCAATGTGCTGCTTGATTCTGAAATGAATGGGAGATTAGGTGATTTTGGATTGGCAAGATTGTATGAACATGGGGTTAACCCAGGCACCACAAGAGTGGTGGGTACCTTGGGCTATTTGGCACCAGAGGTACCTAGAACAGGAAGGGCAACTACAAGCTCTGACGTCTTTGGATTTGGTGCACTTCTGCTTGAGGTGGTGTGTGGTCGCCGGCCTATTGAGCCCAAGGCGTTGCCGGAAGAGTTGGTGCTGGTGGATTGGCTGTGGGAGAGGTACAAAGAAGGGAGAAGAATACTTGATGTGGTCGACCCAAAACTGAATGGCAATTTTGATGAAAGGGAGGTGCTGATGGTGTTGAAATTGGGGTTGATATGCTCAAATGATGTGCCAACTGCTAGGCCTAGCATGAGGCAGGTGGTGAGGTATTTGGATGGAGAAGTTGAGTTGCCAGATGACTTGAGTAAGCCAGGAGATGTAGGTCCCCAGGAGGGCTTTGATGAGTTTCTGCATTCACTCGCATCTTCTTCCTTTGATAAGATGAGCTCAGGCTCCTATTTTGGGAATAGAGATTCTTTTGCTGGTTGA 2001 0.4688 MVSIYQLLSLLLLVLLISASSEPDQLLYAGFNDVGPNNLTLNGVAEIEKNGILRLTNETSRLMGHAFYPSPFQLKNSTTGKALSFSTSFALAIVPEYPKLGGHGLAFTIATSKDLKAHPSQYLGLLNPSDVGNFSNHLFAVEFDTVQDFEFEDINDNHVGIDINSLQSNASAPAGYYTDGSGSTKEGLNIKSGKPIMVWVDYDSAQNLVSVTLSPSSSKPNKPILSFVVDLSPILHDTMYVGFSSSTGLLASSHYILGWSFKIDGPAPPLDLSSLPQLPGPKKKHTSLIIGVSVSLFVVVLCAVGIGIYLFRKIKNADVIEAWELEIGPHRYSYQELKKATKRFKDKELLGQGGFGRVYKGTLPKSKTQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRHRGDLLLVYDFMANGSLDKYLFDGPKTVLSWEQRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDSEMNGRLGDFGLARLYEHGVNPGTTRVVGTLGYLAPEVPRTGRATTSSDVFGFGALLLEVVCGRRPIEPKALPEELVLVDWLWERYKEGRRILDVVDPKLNGNFDEREVLMVLKLGLICSNDVPTARPSMRQVVRYLDGEVELPDDLSKPGDVGPQEGFDEFLHSLASSSFDKMSSGSYFGNRDSFAG* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1279 666 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Dod01g1279 666 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Dod01g1279 666 PANTHER - 8 655 - -
Dod01g1279 666 SUPERFAMILY Protein kinase-like (PK-like) 326 628 IPR011009 -
Dod01g1279 666 ProSiteProfiles Protein kinase domain profile. 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1279 666 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246
Dod01g1279 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 283 IPR013320 -
Dod01g1279 666 Gene3D - 26 264 - -
Dod01g1279 666 Pfam Legume lectin domain 26 275 IPR001220 GO:0030246
Dod01g1279 666 Pfam Protein kinase domain 344 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1279 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Dod01g1279 666 CDD STKc_IRAK 350 617 - -
Dod01g1279 666 Gene3D Transferase(Phosphotransferase) domain 1 421 627 - -
Dod01g1279 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 655 - -
Dod01g1279 666 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1279 Dod-Chr1 26774753 26777342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1279 28 628 Receptor kinase-like Gene Family AT3G55550 63.322 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod01g1279 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1279 - - gmx:100784346 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1279 01 26774753 26777342 Dod01g1279 01 26774753 26777342 ECH