Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1276 ATGGAGTTCAATACCCAAAACTCCACTAACTCAAAGCAGATAAGATGGAATTCGAATGATGAAGGTGGTCAGAGACAATTTAGATCTTATACTTGCACCTTTTGCAAGAGAGGGTTCTCGAATGCACAGGCACTGGGAGGCCACATGAATATTCATAGAAGAGACAGGGCTAAGCTCAAGCAATCATATGAAGAAAACTTGCTTTCCTTGGACATCTCAATCAAGAACACAAGAAATGATTCTTGGGAAGAGGAAGAAGTTGCTAGCAATCATAAAATGCCATTCACTTTTCCTCCTCCTGCTGGCAATGATAATGGCTTTGCATCACAATGGGGAAAGGTAATTGGTGCCGCTGAGCTTGCTCATCTTCCTTCATTTGTTGGGAGGCTAACTGCTGATGAAGGGGAGAAAGATGATTTAGATCTTGAGCTTAAGTTAGGCCCAGCAGAGCCTCAGAAGGCACCAACGTTGGGCATGAGAGAGTTCTTTTGA 492 0.4329 MEFNTQNSTNSKQIRWNSNDEGGQRQFRSYTCTFCKRGFSNAQALGGHMNIHRRDRAKLKQSYEENLLSLDISIKNTRNDSWEEEEVASNHKMPFTFPPPAGNDNGFASQWGKVIGAAELAHLPSFVGRLTADEGEKDDLDLELKLGPAEPQKAPTLGMREFF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1276 163 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Dod01g1276 163 SUPERFAMILY beta-beta-alpha zinc fingers 28 56 IPR036236 -
Dod01g1276 163 PANTHER OS07G0101800 PROTEIN 1 156 - -
Dod01g1276 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Dod01g1276 163 Gene3D Classic Zinc Finger 5 90 - -
Dod01g1276 163 MobiDBLite consensus disorder prediction 1 22 - -
Dod01g1276 163 SMART c2h2final6 30 52 IPR013087 -
Dod01g1276 163 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1276 Dod-Chr1 26681025 26681516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1276 26 156 C2H2 Transcription Factor Family AT3G09290 35.294 9.94e-21 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod01g1276 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1276 - - ccaj:109793777 173.711