Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1275 ATGGTCAATGGGTGCAGTAAGGAGATGGGTAAAGGTGGTTGGACAATGGTTGTTGCTGATAGGGGATGGCACGGTAGCAAACGGTTGAATGGTGTTGAAGGAGAAGAAACTCAAATGATTGATAAAAGCGCAGCTAGAGATATTGTGCTTGAATGTGGTCCAACATATGTGGTTGCCAACCTAATTCTGGCAATAGAATTTCTGAAAAGGGTTTATCACTCGCCCAAGGAAGGCTGGGCTGTTAGAACATGGGACTTTATTCCTTTTGGTGCACCAGTCATTGAATATGTTTTTCTGCTTGCTAAAAGTGCTGACTCAAAGAATGTCACAAGCAACGACTACATATTTGATATTGATTGCTTGCAAACAATCAATGAGGTAGAGGGACTGGAGAAACGGTTGCATGATGTGTCATTACCTACAAACCCTTCTGTTCAAAACGATGATGAGACAATGAAAAGTTGTCCTAAGTTCTGCATAGATGCTGGCTCCTTTAATAATGTTGCTAGATTTATCAACCACGGTTGTGAGCCTATTCAGTGCGTTCAAAGCCCCAACCTAAATATCAAGCAAGCTCGGGTGGTGCTATTTGCCGCACAAGACATAGTGCCTTTCAAAGAAAAGAACCTAATTTTGCTTGAGAAGGTCGACCAAAAGAAGAAGGAATCAAAGTCAGAAGGATATGTTGGGGATATGGAAGTTGTTCCATTCCTATTTCAGTCTTCTCTATGGGGATATATTGTTACAATCGAATGA 756 0.414 MVNGCSKEMGKGGWTMVVADRGWHGSKRLNGVEGEETQMIDKSAARDIVLECGPTYVVANLILAIEFLKRVYHSPKEGWAVRTWDFIPFGAPVIEYVFLLAKSADSKNVTSNDYIFDIDCLQTINEVEGLEKRLHDVSLPTNPSVQNDDETMKSCPKFCIDAGSFNNVARFINHGCEPIQCVQSPNLNIKQARVVLFAAQDIVPFKEKNLILLEKVDQKKKESKSEGYVGDMEVVPFLFQSSLWGYIVTIE* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1275 251 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 44 207 - -
Dod01g1275 251 SMART set_7 67 222 IPR001214 GO:0005515
Dod01g1275 251 Pfam SET domain 78 206 IPR001214 GO:0005515
Dod01g1275 251 Gene3D SET domain 31 210 IPR046341 -
Dod01g1275 251 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 44 207 - -
Dod01g1275 251 SUPERFAMILY SET domain 70 207 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1275 Dod-Chr1 26670905 26672904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1275 45 207 EF-hand Containing Proteins AT5G13960 45.930 2.28e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod01g1275 SET 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1275 - K11420 lja:Lj0g3v0265609.1 179.489