Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1274 ATGATGACTCATGGGAAGAGCAAGCTTTTGCTAAAGATGCAGCTGGGGCTGCATGGTTGCATATGGCCACCAAGATCATATTCTTGTAGCTTTTGCAGAAGAGAGTTCAGGTCAGCACAAGCTCTTGGTGGCCATATGAATGTTCATAGGAGGGATAGAGCAAGGTTAAAGCAGCCATCTAGCCCACAAAATGAAATTTTGAGTCATGACCTTGAAACTCACCCCCACAATCCTGCTCAAAATTACCCTTTCACTTCTTTGGGTTACCTATACCCGTCTTCCCTTTGTGGATTGGATTATAACACTAACCCTAACTATGATCCTATTCCTTCCCATGTTCTTGCTTCACCTTACAAGGTCTTAGCTGCATCAGTTAATAAGAACTGCAGAGAGGAAACCATGATTCCACTTTGTAATGATCCTATTTTCAAAGGATGCCACAAGACTACTTCTCCTGCTCATGTTTCCAAATCCAGGCCAAATTTTGCTGAAGACTGCAGATTGTATTCACATGAGTTGAACCCTGAACCTGATGTTGAGAGAACCTCAAAGAGATTGGATTCTGGATGTAGGAGTAAGGGGAGTAGTGATAAAACTGATGATGCGGCTAATGGGGCTCACCCATCTGTTCAATTAGAGACTAAAGAGGCAGATATAAGTTTCAAGAAGAGGAAAACAGACGCTTCATTAATTCCATTGTTCCCAATGTCAAGTTCAGTTGATAAACACCATGTGCAATCACAGCTGTTTGAATTTAGCCCAAGCTTCATTGAGGAGCTGGATCTGGAGCTAAGGCTTGGTTACAGGCCCCAGGTATAG 819 0.4286 MMTHGKSKLLLKMQLGLHGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPSSPQNEILSHDLETHPHNPAQNYPFTSLGYLYPSSLCGLDYNTNPNYDPIPSHVLASPYKVLAASVNKNCREETMIPLCNDPIFKGCHKTTSPAHVSKSRPNFAEDCRLYSHELNPEPDVERTSKRLDSGCRSKGSSDKTDDAANGAHPSVQLETKEADISFKKRKTDASLIPLFPMSSSVDKHHVQSQLFEFSPSFIEELDLELRLGYRPQV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1274 272 MobiDBLite consensus disorder prediction 177 213 - -
Dod01g1274 272 Pfam C2H2-type zinc finger 27 51 - -
Dod01g1274 272 SMART c2h2final6 27 49 IPR013087 -
Dod01g1274 272 PANTHER OS07G0101800 PROTEIN 17 271 - -
Dod01g1274 272 MobiDBLite consensus disorder prediction 177 200 - -
Dod01g1274 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Dod01g1274 272 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 17 271 - -
Dod01g1274 272 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Dod01g1274 272 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Dod01g1274 272 Gene3D Classic Zinc Finger 23 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1274 Dod-Chr1 26644430 26645605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1274 16 270 C2H2 Transcription Factor Family AT5G06070 33.333 7.30e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod01g1274 zf-C2H2_6 1.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1274 - - vra:106758996 306.99