Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1263 ATGAAGCAACATAAGATCACAACGTTAATACTCACAATTGCAGCATTGTTTCTATCATGCGTTGCACTTGCCACGCGCCGATGCGGGAATTGTGGTCCGAACCCGGTTCCATACCCGTTAAGCACTGGACCCGCCTGCGGTGACCCGGCGTACAAGATCCGGTGCGCCGCAGGTGCATTGTGGCTTGATGCACTTGCCGGGTCATCCTACACGATCCGGTCCATTGACCCGGAAACCCGCCGAATCATAATCCGACCCGCCACGCTCAATAGAGGCACGTGCGTGTCCACGGACTTCCACAGCGAAGGCATTCGCCTGAATGAGTCCCTCCCTTTCAGCATTGCAACTGGCAACACCATCTTCCTGTTGAATTGCACCGTCAACACGCCTCACGCGCCGCCAATGGACTGCGCCCCAAGCAGCATGTGCCATAATTACATTAGGGACCATGTGGATGCGGGCGAGTGCCGGCGCGTGAGCATGTGCTGCGCGTACAAGACTGATGTGGCTTACAAGGAGTACGAGGTTCGGGTTCATGGGGGAGGGTGCGCGGCGTATCAGAGTTTTGTGGATTTCAAGGGTGCGGTGGCGCCGCCGGGGAAGGGGTGGCCGGAGCCAGGGGTGGGGATCGAGTGGGTGACGCCACAGGAACCGGCTTGTAAGGGGCCAATGGATTGCAAAGAGTTGCTGAACTCGAATTGTGGGGTGGGCCCCGCAAATGGTGGGGTGCAAAGGTGCTCATGCAACGCTGGCTTCAAATGGGATCCTATCAATGGATCGTGTCAACCTCAAAATCAAACCCAAAGTCAAACTCAAACCGTGGCTGCTTGTTTAGGCGTAACAGTCTTGATTGCAATAGCAATTGGAGCCCTTTTCTTCATGAAGCATAGTCATTCAAATACACAAGCAAAGAAGACCGTAAACAAAAGGAAGAAAGAAATCACAAGTGCCAAAGCCAGTGCTTTGTCATCCAGGATCTTCACTGGCAGGGAGATCAAGAAAGCAACCAACAACTTCTCCAAAGAGAACCTCATTGGCTCCGGTGGCTTTGGTGAAGTGTTCAAGGGAACTTTTGATGATGGAACCATCACTGCCATCAAGCGTGCCAAGCTTGGAAACACAAAAGGCATTGACCAGATACAAAACGAGGTCAGAATACTTTGCCAAGTGAACCATAGGAGCCTAGTGAGACTCCTTGGGTGTTGTTTGGAGCTAGAGCACCCTTTGCTAATATATGAGTATGTCTCTAATGGGACACTCTTTGATTACCTGCATCGCCAACCTTTCGGCACAAGGGAGCCCCTCAAATGGCACCACAGGCTCAAGATTGCATACCAAACAGCAGAAGGGCTTTCATACCTGCATTCTGCTGCAGTGCCCCCCATTTACCACCGCGATGTGAAGTCAAGCAATATTCTTCTTGATGACAAGTTTGATGCCAAGGTTTCTGACTTTGGCTTATCTAGGCTTGTTGAACTAGCTGAGGAAAACAAGAGCCATATCTTCACTAGTGCTCAGGGAACACTAGGATACCTTGACCCTGAGTACTACCGGAACTTTCAATTGACCGATAAGAGCGATGTGTACAGCTTCGGAGTGGTGCTGATGGAGCTGCTCACTGCTCAGAGAGCCATTGATTTCAGTAGGGAGGAAGAGAATGTGAACTTGGCAGTGTATGCAAAGAAGAAAATGGGTGAGGACAAGTTCATGGATGTTGTTGATCCATTGCTTAAAGAAGGAGCTAGCAATTTGGAATTGGAGACAATGAAGTCATTGGGGTATCTTGCAGCTGCATGCTTGGATGATCAGAGGCAAAAACGGCCTTCTATGAAAGACGTCTCAGGTGAGATTGAATACCTAATTAATATTGTTAAGGGTCAGGGGTCCAAACCATAA 1896 0.5016 MKQHKITTLILTIAALFLSCVALATRRCGNCGPNPVPYPLSTGPACGDPAYKIRCAAGALWLDALAGSSYTIRSIDPETRRIIIRPATLNRGTCVSTDFHSEGIRLNESLPFSIATGNTIFLLNCTVNTPHAPPMDCAPSSMCHNYIRDHVDAGECRRVSMCCAYKTDVAYKEYEVRVHGGGCAAYQSFVDFKGAVAPPGKGWPEPGVGIEWVTPQEPACKGPMDCKELLNSNCGVGPANGGVQRCSCNAGFKWDPINGSCQPQNQTQSQTQTVAACLGVTVLIAIAIGALFFMKHSHSNTQAKKTVNKRKKEITSAKASALSSRIFTGREIKKATNNFSKENLIGSGGFGEVFKGTFDDGTITAIKRAKLGNTKGIDQIQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVSNGTLFDYLHRQPFGTREPLKWHHRLKIAYQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKFDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQRAIDFSREEENVNLAVYAKKKMGEDKFMDVVDPLLKEGASNLELETMKSLGYLAAACLDDQRQKRPSMKDVSGEIEYLINIVKGQGSKP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1263 631 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Dod01g1263 631 ProSiteProfiles Protein kinase domain profile. 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1263 631 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 17 626 - -
Dod01g1263 631 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Dod01g1263 631 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 626 IPR045274 GO:0007166
Dod01g1263 631 SMART serkin_6 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1263 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Dod01g1263 631 CDD STKc_IRAK 345 613 - -
Dod01g1263 631 Gene3D Phosphorylase Kinase; domain 1 297 414 - -
Dod01g1263 631 Pfam Protein kinase domain 340 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1263 631 SUPERFAMILY Protein kinase-like (PK-like) 316 614 IPR011009 -
Dod01g1263 631 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1263 Dod-Chr1 26270061 26275984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1263 27 624 Receptor kinase-like Gene Family AT5G02070 57.073 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod01g1263 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1263 - - aprc:113862410 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1263 01 26270061 26275984 Dod01g1263 01 26270061 26275984 ECH