Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1252 ATGGCCATGTTCCTCAAAACATGCAAAGGAAGGCACAATACCAACTGCAAAATCCAAGGTCCTCAGAGAGGCTCAGACTTTGGGAAAACAAACTCTACATTGATGGCCATCACCCTCAATCTGTGCTTCGCCGCTTCCCCTCCCAATCGCCGCATCCCTTGTTCCAGTGCTCCACGCCGCACCTGTGTTGCTGTGAGGTCTTACCTTGCCATGGAGGAGAAGCCAGCCTCCCAGAACCAAATGCTCGTGCATGTGCCTCCTCATCCCTTAATCAAGCACTGGATTTCTGTTCTGAGGAATTCAGAGACTCCTTGTCCTGTCTTCAGAAATGCAATGGCCGAGTTGGGAAGGCTATTACTCTATGAAGCTTCGCGGGATTGGTTGCCTACTGTTGCTGGAGAGGTTCAAACACCAATGGGTGTTGCCTCAATACAGTTCATAGATCCAAGGAAGCCTGTGGCTGTCATCCCAATTATACGAGCTGGTCTTGCTCTTGCTGAACATGCATCATCAATCTTGCCTGCATTTAAAACCTATCATCTAGGAATAAGCAGAGATGAGGAAACACTCAAGCCAACTGTGTATTTGAACAAGTTACCCCAGAAATTTGCAGAAGGATCTAAAGTATTTGTGGTTGATCCTATAGTGGCAACAGGTGGTACTATAATGGCAGCACTGAAGCTCTTAAATGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTCTCTCTGCCTCTCCAGCTCTGCAAAAGCTACGTGAGCAGTTCCCTGGGCTTCAAGTGTACACTGGAGTAATTGATGCCAAAGTTAATGACATAGGGTTCATAGTTCCAGGGCTAGGAGATGCAGGGGACCGCAGCTTTGGCACCTGA 879 0.4778 MAMFLKTCKGRHNTNCKIQGPQRGSDFGKTNSTLMAITLNLCFAASPPNRRIPCSSAPRRTCVAVRSYLAMEEKPASQNQMLVHVPPHPLIKHWISVLRNSETPCPVFRNAMAELGRLLLYEASRDWLPTVAGEVQTPMGVASIQFIDPRKPVAVIPIIRAGLALAEHASSILPAFKTYHLGISRDEETLKPTVYLNKLPQKFAEGSKVFVVDPIVATGGTIMAALKLLNERGVGNKQIKVISALSASPALQKLREQFPGLQVYTGVIDAKVNDIGFIVPGLGDAGDRSFGT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1252 292 SUPERFAMILY PRTase-like 83 291 IPR029057 -
Dod01g1252 292 CDD PRTases_typeI 148 268 IPR000836 -
Dod01g1252 292 TIGRFAM upp: uracil phosphoribosyltransferase 83 292 IPR005765 GO:0004845|GO:0006223
Dod01g1252 292 PANTHER URIDINE KINASE 51 288 - -
Dod01g1252 292 Gene3D - 70 292 IPR029057 -
Dod01g1252 292 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 51 288 - -
Dod01g1252 292 Pfam Uracil phosphoribosyltransferase 85 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1252 Dod-Chr1 26080402 26085830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1252 41 292 PRT Gene Family AT3G53900 66.667 5.44e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1252 K00761 - gmx:100797537 409.453