Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1233 ATGCGTAGTGGGAGAGAGAACCAGGTGTGGCTAATGGCTTTTAAACAATGTGTGCCTGAGCTATACAAACCAACTTTATTCTCTCCCATGGTTCACCTATATCTTTCATTATTTCCCATTATTACTATTATTATTGCTGTTGTGTTTAAGCTTAAGCTAGTGAGAAGATTCAAAATCAAACCCAATGATCTGAATCTGCCTCCATCCCCAACAAAGCTACCAATCATTGGCAATCTTCATCAGCTAGGCACACTGCGATATCGCTCTTTCAGATCCCTCTCACAAAAGTGTGGTGCTGCAGATCTCATGCTGTTGCACTTGGGGAACACCCCAACTCTGGTGGTTTCATCAGCAGAAGCTGTCAGTGAAATCACGAAAGCTCATGACTTGGCATTCTCAAACCGACCCCAAAGCACAGCCACAAAGACCTTGCTGTATGGATGCACTGACATTGGTTTTTCACCCTATGGAGAGACCTGGAAGCACAAGAGAAAAATATGTGTCCGTGAACTTCTGAACCCGAAAAGGGTTCAGTCATTTCGTTTCATCAGGGAAGAATCCGTTGAGGAATTGGTTAACAAGTTGCGTGAAGCAAGCTCCAATGATGATGCATGCTCTGTGAATCTAAGTGAGATGCTTATTGAAACAGCAAACATTATCATTTGTAAATGTGCTCTTGGACTCAAGTTTAGTGCTACAAAAGATTCTTACAGTAGTGTGAAAGAGCTAGCACGAAAGGCGATGATTCAGCTTGCAGAATTCACTGTGGGAGATCACTTTCCTTTGCTGGGTTGGGTTGATGTTCTGAGTGGCAAAACTAAAGAATTCAAGGCCACTTTTGCGGCACTGGATGCTTTGTTTGATGAGGTAATTGCGGAGCACAAGAGGATTAGGAGGGAAGCTGATGGCAATGAGAAAGACTTTGTGGATATACTCATCCAAGTTCAGGAGGGTGGCATGCCTGGCTTTGAGCTCACCAACAATGACATTAAAGCAATTCTACTGGACATGTTTACAGCAGGAAGTGACCCAATTGCAGTAGCACTAGAATGGGCAATGACAGAACTGGTGAAAAATCCAATCACATTGAAGAAAGCACAAGAAGAGGTCAGAAGGGTTACAGGGCGTAAATCAAGAGTAGAAGAAAGCGAGATCAACCAAATGAACTACTTGAAATGTGTATTGAAAGAAACTCTAAGGTTACATCCAGCTGCTCCCCTGCTAGCTCCTAGAGAGACATCATCTCATGTGAATCTCAAAGGGTACGACATTCCGGCAAAAACACCTGTACATGTGAATGCATGGGCTATCCATAGGGACCCTGAATTCTGGGAAAGGCCAGAAGAGTTCATTCCAGAGAGACATGATGGTAACGGCCAGGCCCAGGTTCAGTTCAAAGGCCAAGACTTCCAATTCATCCCATTTGGTTTTGGGAGAAGAGGATGCCCTGGAATGACTTTTGGGCTTGCTTCAACGGAATATGTGCTTGCTAACCTTCTTTATTTCTTCAATTGGAAGTTGCCTCCCACTACTATCTCTGAACAAGGCATAGACATGAGCGAGACATTTGGGCTCCTTGCCTCCAAAAAAGTCCCACTTCACCTTAAGCCCATTGCTTTTGCATTCGAATGA 1632 0.4393 MRSGRENQVWLMAFKQCVPELYKPTLFSPMVHLYLSLFPIITIIIAVVFKLKLVRRFKIKPNDLNLPPSPTKLPIIGNLHQLGTLRYRSFRSLSQKCGAADLMLLHLGNTPTLVVSSAEAVSEITKAHDLAFSNRPQSTATKTLLYGCTDIGFSPYGETWKHKRKICVRELLNPKRVQSFRFIREESVEELVNKLREASSNDDACSVNLSEMLIETANIIICKCALGLKFSATKDSYSSVKELARKAMIQLAEFTVGDHFPLLGWVDVLSGKTKEFKATFAALDALFDEVIAEHKRIRREADGNEKDFVDILIQVQEGGMPGFELTNNDIKAILLDMFTAGSDPIAVALEWAMTELVKNPITLKKAQEEVRRVTGRKSRVEESEINQMNYLKCVLKETLRLHPAAPLLAPRETSSHVNLKGYDIPAKTPVHVNAWAIHRDPEFWERPEEFIPERHDGNGQAQVQFKGQDFQFIPFGFGRRGCPGMTFGLASTEYVLANLLYFFNWKLPPTTISEQGIDMSETFGLLASKKVPLHLKPIAFAFE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1233 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Dod01g1233 543 Pfam Cytochrome P450 67 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 Coils Coil 363 383 - -
Dod01g1233 543 PANTHER CYTOCHROME P450 71B11-RELATED 31 540 - -
Dod01g1233 543 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 120 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 SUPERFAMILY Cytochrome P450 67 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod01g1233 543 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 31 540 - -
Dod01g1233 543 Gene3D Cytochrome P450 53 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1233 Dod-Chr1 25339923 25342373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1233 34 539 Cytochrome P450 AT1G13110 41.406 1.09e-134 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1233 K20617 - gmx:100785621 665.611