Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1219 ATGTCAGCAACAACCACCGTAGACAGCATGCCGGCCCCGTACAATTCCACGGTGGCGACTCGGCTAGGCCGCCGGAGAATTCCGATACACACCACCTTCTACTGGGCCGACAAGGTGGACATACTGTTCCATTGCTGGCCCGGCAACAGCGCCGCCATGTATGCGGTGGCGCTACTGCTGGTGTTCGCCATGGCGGTGCTGGTGGAGTGGCTCTCCTTCACCAACATAGTGAAACTCAAGCCCGGGGGATCGAACGACGTCGTTTCGGGGCTACTGAAGACGGGGCTATACGGCGTGCGTTCCGGGCTCTCTTACTTGGTGATGCTGGCCGTCATGTCGTTTAACGGGGGCGTGTTTCTCGCCGCAATTGGCGGCCACGTCATTGGGTTCTTGGTTTTCGGTACGCGGGCTATTATTCGTAAGAAGTCGGATGGGTCGGATTCTTCCAAACCGTAG 456 0.5833 MSATTTVDSMPAPYNSTVATRLGRRRIPIHTTFYWADKVDILFHCWPGNSAAMYAVALLLVFAMAVLVEWLSFTNIVKLKPGGSNDVVSGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLVFGTRAIIRKKSDGSDSSKP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1219 151 Pfam Ctr copper transporter family 32 74 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod01g1219 151 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod01g1219 151 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 5 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Dod01g1219 151 PANTHER COPPER TRANSPORTER 4 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1219 Dod-Chr1 24974556 24975404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1219 32 144 Inorganic Solute Cotransporters AT5G59030 48.673 1.15e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1219 K14686 - gmx:100803410 246.514