Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1158 ATGAAGCTTGTACCGCTTTGGGGATTTCTTCTTCTTATGTCCTTTTGTGGCTTCTTGAGGGCCACTTCACCTCATGTTGCAAGCTTTTCTTCCCTGAGTGATGCAGTGACGATAGAAGGCAGTGAAGCAGATGCTCTGCTGAAGTGGAAAGCGAGCCTTGACAACCAAAGCCAGGCTTTCCTATCTTCATGGACCGGTAATAGTCCTTGCAATAAATGGGTGGGAATTGAATGTGATGATGTGTCCAAATCCATCTCCAAGCTAAACCTTTCTAGGTTTGGACTGAGAGGTACGCTTCAAAGTCTCAATTTCTCATCACTTCCGGATGTCGTTTCCATAGATTTACAAAACAACTCCTTGTATGGAATGATTCCCAACCGAATTGGGGTAATGTCCAATCTAGACACTCTAGATTTATCCTTTAATAATTTCTCTGGTAGCATTCCCAAAAGCATTGGTAATTTGTTCAAACTCTCCTATCTTAGTCTTCGAGACAATCGTCTCAATGGGAGTATTCCATCTGAGATAACACAGTTGGTTGGTCTTCAGTCATTGATCTTGCGTGATAATGCTTTTTTGAGTGGAGTCATTCCTGAAGAAATAGGTGCATTGAGGAGTCTGAGGGGGCTAGATATTAGTGGGTGCAATCTATCTGGGTCGCTCCCTGTATCAATAGGAAAGTTGGTCAATTTAACACACCTCCACTTGAGTGAGAACCAACTTTATGGTCCAATTCCTCATCAGATTGGGAAACTGGTGAACCTCCAATCTTTGTATCTTCAAGGGAATAATCTTTCCGGCTCCATTCCTCAAGAAATTGGATTTCTTAAACAAATGTATGAACTTGATTTGTCTGATAACTCCCTCTCTGGTACAATCCCTTCTACGATTGGAAACTTGAGCAATTTACTATATTTTTACCTTTATGCCAACTCTCTCTCTGGCTCCATTCCTAATGAAGTTGGAAAAATGTATTCCCTTCGTACAATCCAATTGGCAGTGAATAACCTTTCCGGGCCAATCCCACCATCCATTGGTAACTTATCCAACATGGATTCTATTGTCATATTTCAAAATAAATTCTCTGGACCAATTCCTTCCGCCATTGGAAACATGACAAAGCTCACTGTGTTAAGTCTTCAACATAATGGCCTTTCTGGTTCCATGCCCCCAGAACTTGGGATGCTGGGGAATCTAAGAGAACTAATTATGGGCTCTTGCAATCTATCTGGGTCGCTCCCTGTATCAATAGGAAAGTTGGTCAATTTAACACACCTCCACTTGAGTGAGAACCAACTTTATGGTCCAATTCCTCATCAGATTGGGAAACTGGTCAACCTCCAATCTTTGTATCTTCAAGGGAATAATCTTTCCGGCTCCATTCATCAAGAAATTGGATTTCTTAAACAAATATATGAACTTGATTTGTCTGATAACTCCCTCTCTGGTACAATCCCTTCTACGATTGGAAACTTGAGCAATTTACTATATTTTTACCTTTATGCCAACTCTCTCTCTGGCTCCATTCCTAATGAAGTCGGAAAAATGTATTCCCTTCGTACAATCCAATTGGCAGTGAATAACCTTTCCGGGCCAATCCCACCATCCATTGGTAACTTATCCAACATGGATTCTATTGTCATATTTCAAAATAAATTCTCTGGACCAATTCCTTCCGCCATTGGAAACTTGACAAAGCTCACTGTGTTAAATCTTCAAGATAATGGCCTTTCTGGTTCCATGCCCCCAGAACTTGGGATGCTGGGGAATCTAAGAGAACTAATTATGGGCTCTTGCAATCTATCTGGGTCGCTCCCTGTATCAATAGGAAAGTTGGTCAATTTAACATACCTCCACTTGAGTGAGAACCAACTTTATGGTCCAATTCCTCATCAGATCGGGAAACTGGTCAACCTCATATCTTTGTATCTTCAAGGGAATAATCTTTCCGGCTCCATTCCTCAAGAAATTGGATTTCTTAAACAAATGTATGAACTTGATTTGTCTGATAACTCCCTCTCTGGTACAATCCCTTCTACGATTGGAAACTTGAGCAATTTAATATTTTTTTACCTTTATGGCAACTCTCTCTCTGGCTCCATTCCTAATGAAGTCGGAAAAATGTATTCCCTTGGTACAATCCAATTGGCAATGAATAACCTTTCCGGGCCAATCCCACCGTCCATTGGTAACTTGCTCAACATGGATTCTATTGTCATATTTCAAAATAAATTCTCTGGGTCAATTCCTTCCTCCATTGGAAACTTGACAAAGCTCACTGTGTTAGATCTGTTCTCAAACGAATTTAGTGGCAACATTCCAATGGAAATTAATAGGATTACCAATTTGAAAATTCTGGAGTTGTCTGATAATAATTTCACAGGCCACTTGCCACAAAACATTTGTATTGGTGGAAAGCTAGCACGCCTTTATGCTGAAAATAACCATTTCGCTGGTCCAATTCCAATGAGTCTGAAAAATTGCTCTACTCTGTTAAGAGTGATGCTTGCCCGAAATCAATTCATTGGAAATATATCAGAGGATTTCGGTGTGTATCCATCTTTGGACTTCATTGATTTTAGTGACAATAATTTTTATGGCCACCTATCACCAAATTGGGGGAAGTGCTATAACTTGAAAACCTTCAAGATCTCCAATAACAATTTATCAGGTGGTATACCATTGGAGTTGGGTGATGCAATCAACTTGCATATACTTGACCTATCTTCAAACCATCTCACAGGAGAAATTCCAAAGGAACTAGGAAAACTTACTTTATTGATCAAGCTATTGTTAAGCAACAATAAACTTTCAAGAAACATTCCCATACAAATAGCATCATTGCAGGAGCTTGACACCTTGGAGCTTGCTGCAAATGATCTCGGTGGTTTCGTCACAGAAGAGCTTGGAAGGTTGCCCAAGTTACTGCACTTGAATTTGAGCCAAAATAAATTCAATGGAACTATTCCTATTGAATTTGGTCAATTCAAAGTTCTTCAAAGTCTTGATCTTAGCAGGAACTTTTTGCACGGAAGCATTCCAGCAATATTTGGGCAGTTGAAATACTTAGAAACATTAAATGTTTCTCATAATAATCTTTCTGGTGTCATCCCCTCCAGCTTTGATGAGATGTTAAGCTTGACTAATATTGATATTTCATATAACCAGTTGGAGGGCCAACTTCCAAACAATCCAGCCTTCAGAAAAGCTCCAATAGAAGCATTGACAAACAATAAAGGTCTATGTGGTAATGTCACTGGGATGGAGCCTTGCCCAACATCAAGAAGCAAATATCATAATCACAAGGATAAAAAAGTTGTACAGCTAGTTTTGCCCCTTACTTTGGGCATTCTAATGCTAGCATTCTTGGCCTTTGTAATCTCAAGTTGTCTATACCGAAGTGGAGGTGCAAAAGAAAGCAAGATTCCAGAGAGACAGACTCAAAATTTATTTGTGATATGGAGTTATGATGGTAAGATAGTGTATGAGAACATTATTGAAGCTACAGAAGAGTTTGATGACAAGTATCTCATTGGAGTTGGAGGGCATGGATCAGTTTATAGAGCTGAGTTGTCCTCAGGTCAAGTTGTCGCTATAAAGAAACTCCACGCCGTAAATGAAGAAATTCTTAACCTAAAAGCTTTCCATAGTGAGATTCAAGTTTTGACAGAAATTCGACATCGTAATATTGTGAAGTTATATGGGTTTTGTTCTCATTCACGATGCTCCTTTTTGGTGTATGAGTTTATAGGAAGAGGTAGCATTGATAAGATTCTAGCCAGTGATGCCCAAGCAATGGAATTTGATTGGAATAGAAGGGTGAATGTTGTTAAAGGAGTAGCTAGAGCTTTATGCTATATGCACTATGATTGTTCTCCTCCAATTGTTCATCGGGACATATCAACAAAGAATGTTCTTCTAGACTCCGAGTATGAGGCCCATGTCTCAGATTTTGGAACAGCAAAGCTTCTTAATCCAAATTCATCCAACTGGACTTCCTTTGCTGGGACCTTTGGATATGCTGCTCCAGAACTTGCTTACACAATGGAAGTGAATGAAAAATGTGATGTCTATAGCTTTGGGATATTAACCTTTGAAATACTTTTGGGAAAGCATCCTGGAGAGGTTACAGAATCTATGGTCCTACCGCATGCACCTTCGAGCATGATGACACTTGTCTCGACACTTGATAGTTTTCTATTGAAGGATAAGTTGGATCAACGCCTTCCTCATCCTACAAATCAAATGGTGAAGGAATTGGTATCAATTGTAAAGATAGCAAGTGCATGTTTGACTGAGAGTCCACGTGTTCGTCCTACCATGGAGCAAGCAATGAAGGAACTTGTGGTGCCAATGTCAGCTTCTATGGATTAA 4374 0.3967 MKLVPLWGFLLLMSFCGFLRATSPHVASFSSLSDAVTIEGSEADALLKWKASLDNQSQAFLSSWTGNSPCNKWVGIECDDVSKSISKLNLSRFGLRGTLQSLNFSSLPDVVSIDLQNNSLYGMIPNRIGVMSNLDTLDLSFNNFSGSIPKSIGNLFKLSYLSLRDNRLNGSIPSEITQLVGLQSLILRDNAFLSGVIPEEIGALRSLRGLDISGCNLSGSLPVSIGKLVNLTHLHLSENQLYGPIPHQIGKLVNLQSLYLQGNNLSGSIPQEIGFLKQMYELDLSDNSLSGTIPSTIGNLSNLLYFYLYANSLSGSIPNEVGKMYSLRTIQLAVNNLSGPIPPSIGNLSNMDSIVIFQNKFSGPIPSAIGNMTKLTVLSLQHNGLSGSMPPELGMLGNLRELIMGSCNLSGSLPVSIGKLVNLTHLHLSENQLYGPIPHQIGKLVNLQSLYLQGNNLSGSIHQEIGFLKQIYELDLSDNSLSGTIPSTIGNLSNLLYFYLYANSLSGSIPNEVGKMYSLRTIQLAVNNLSGPIPPSIGNLSNMDSIVIFQNKFSGPIPSAIGNLTKLTVLNLQDNGLSGSMPPELGMLGNLRELIMGSCNLSGSLPVSIGKLVNLTYLHLSENQLYGPIPHQIGKLVNLISLYLQGNNLSGSIPQEIGFLKQMYELDLSDNSLSGTIPSTIGNLSNLIFFYLYGNSLSGSIPNEVGKMYSLGTIQLAMNNLSGPIPPSIGNLLNMDSIVIFQNKFSGSIPSSIGNLTKLTVLDLFSNEFSGNIPMEINRITNLKILELSDNNFTGHLPQNICIGGKLARLYAENNHFAGPIPMSLKNCSTLLRVMLARNQFIGNISEDFGVYPSLDFIDFSDNNFYGHLSPNWGKCYNLKTFKISNNNLSGGIPLELGDAINLHILDLSSNHLTGEIPKELGKLTLLIKLLLSNNKLSRNIPIQIASLQELDTLELAANDLGGFVTEELGRLPKLLHLNLSQNKFNGTIPIEFGQFKVLQSLDLSRNFLHGSIPAIFGQLKYLETLNVSHNNLSGVIPSSFDEMLSLTNIDISYNQLEGQLPNNPAFRKAPIEALTNNKGLCGNVTGMEPCPTSRSKYHNHKDKKVVQLVLPLTLGILMLAFLAFVISSCLYRSGGAKESKIPERQTQNLFVIWSYDGKIVYENIIEATEEFDDKYLIGVGGHGSVYRAELSSGQVVAIKKLHAVNEEILNLKAFHSEIQVLTEIRHRNIVKLYGFCSHSRCSFLVYEFIGRGSIDKILASDAQAMEFDWNRRVNVVKGVARALCYMHYDCSPPIVHRDISTKNVLLDSEYEAHVSDFGTAKLLNPNSSNWTSFAGTFGYAAPELAYTMEVNEKCDVYSFGILTFEILLGKHPGEVTESMVLPHAPSSMMTLVSTLDSFLLKDKLDQRLPHPTNQMVKELVSIVKIASACLTESPRVRPTMEQAMKELVVPMSASMD* 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1158 1457 ProSitePatterns Protein kinases ATP-binding region signature. 1178 1201 IPR017441 GO:0005524
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 273 445 - -
Dod01g1158 1457 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 804 876 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 877 951 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 195 249 IPR032675 -
Dod01g1158 1457 SUPERFAMILY RNI-like 701 1060 - -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 250 339 IPR032675 -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 434 566 - -
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 16 201 - -
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 463 635 - -
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 198 374 - -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 588 1455 - -
Dod01g1158 1457 Gene3D Phosphorylase Kinase; domain 1 1133 1249 - -
Dod01g1158 1457 SMART LRR_sd22_2 468 494 - -
Dod01g1158 1457 SMART LRR_sd22_2 131 157 - -
Dod01g1158 1457 SMART LRR_sd22_2 372 387 - -
Dod01g1158 1457 SMART LRR_sd22_2 444 463 - -
Dod01g1158 1457 SMART LRR_sd22_2 660 686 - -
Dod01g1158 1457 SMART LRR_sd22_2 276 302 - -
Dod01g1158 1457 SMART LRR_sd22_2 252 267 - -
Dod01g1158 1457 Pfam Leucine rich repeat 999 1057 IPR001611 GO:0005515
Dod01g1158 1457 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Dod01g1158 1457 Pfam Leucine rich repeat 205 265 IPR001611 GO:0005515
Dod01g1158 1457 ProSiteProfiles Leucine-rich repeat profile. 902 925 IPR001611 GO:0005515
Dod01g1158 1457 ProSiteProfiles Protein kinase domain profile. 1172 1450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1158 1457 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1295 1307 IPR008266 GO:0004672|GO:0006468
Dod01g1158 1457 Pfam Protein kinase domain 1174 1447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1158 1457 SUPERFAMILY RNI-like 474 798 - -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 438 531 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 532 634 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 340 437 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 952 1092 IPR032675 -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 39 194 IPR032675 -
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 434 566 - -
Dod01g1158 1457 SMART LRR_typ_2 444 468 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 636 660 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 972 995 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 924 948 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 780 804 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 300 324 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 131 155 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 372 396 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 228 251 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 179 204 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 996 1019 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 1020 1043 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 252 276 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 684 708 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 612 635 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 564 588 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 492 516 IPR003591 -
Dod01g1158 1457 SMART LRR_typ_2 420 443 IPR003591 -
Dod01g1158 1457 SUPERFAMILY L domain-like 255 468 - -
Dod01g1158 1457 Gene3D Ribonuclease Inhibitor 639 803 IPR032675 -
Dod01g1158 1457 Pfam Leucine Rich Repeat 902 924 IPR001611 GO:0005515
Dod01g1158 1457 SUPERFAMILY Protein kinase-like (PK-like) 1151 1448 IPR011009 -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 201 - -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 463 635 - -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 198 374 - -
Dod01g1158 1457 SUPERFAMILY L domain-like 41 315 - -
Dod01g1158 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 273 445 - -
Dod01g1158 1457 Gene3D Transferase(Phosphotransferase) domain 1 1251 1454 - -
Dod01g1158 1457 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 588 1455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1158 Dod-Chr1 23496526 23501082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1158 375 918 Receptor kinase-like Gene Family AT4G08850 36.765 7.77e-93 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g1158 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1158 - - vvi:100248982 1381.7