Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1146 ATGACCCCCACGCTTCTTTTTACGTGCTTTTGTGCCTTTGTAATGGCAACTTCACTTCATGTTGCCGGTTCTTCCATGAACGCTTCGTATGCTTCAGCTACACGGCAAAGCAGCGAAGCAGTTTCCCTGTTGAAGTGGAAAGCGAGCCTTGACAAGGAAAGCCAGGTTTTGCTTTCTTCGTGGAATGGCAACAATCCATGCAAGTGGGTGGGAATCACATGTGATGACGAGTCTAAATCTATCTCTAAGCTGACTCTGATGAGTATGGGATTAAGAGGTACGCTTCGAAGTCTCAATTTCTCATCACTTCCAAATATCCTTGCTATAGTTTTAAGGAACAACTCCCTGAACGGAACAGTTCCCAATCAAATAGGGGTGATGTCCAATCTGAATAGTCTTGATTTGTCCATTAACCAACTCTCTGGTAGCATTCCTGAGAGCATTGGTAATCTGTCAAAACTCTCCTGTCTTAATCTTAGCCATAGCTATCTCACGGGTTCTATCCCTAGTTCTATCGGGATGTTGGTTAATATTTCACGACTCTTACTAAGTAACAACCAACTTTCTGGCCCCATTCCTCGTGAAATTGAGAAGCTGATCAACTTGCGTTATCTATGGCTTCAAGATAATGATCTTTCAGGTTCCATTCCTCAAGAGGTTGGATCTATGAGGATGCTCTTTCAGCTTGATTTTTCGATGAATTATCTCTCTGGTAGAATCCCCTCTACAATTACAAACTTGAGCAATTTAAAATATCTTTATCTTTATGCAAACTCTCTCTCTGGTGCCATTCCAGAAGATATTGGTAACCTTTATTCTCTCACCACAATCCAGTTGTTAGCGAATAACCTTTCTGGACCAATTCCACCCTCCATAGGTAACTTGGTCAATTTGGATTCCATTCATATATGGAAAAATAGCATCTCTGGATCAATTCCTGTCACTATTAAAAACCTAACAAAGCTCACACAGTTGGCTTTATACTCAAATGAACTTTCTGGGCCAATCTCATCCTCAATAGGTGACTTGGTCAATTTGGATTCCCTACATCTTGAAGATAACAGGTTCTCAGGACAAATTCCTTCCACTATTCAAAACTTGACAAAGCTCAGAATATTGTCTTTGGGATCAAATGAGATTTTTGGGCCAATACCACCTTCAGTAGGTAGATTAGTCAATGTGGAGTATATTTCCCTTATGAGTAATAGACTATATGGATCAATTCCTTCCGTTATTGGAAACTTGACCAATTTGACTAGTCTGCAATTAGCTTATAATAATTTCACAGGTTATTTGCCTCACAACATTTGCAATAATGGAAAGCTTGAGAACATAAGCATTATAAATAACCAAGTCATAGGCCCAGTTCCAAAGAGCTTGAAGAACTGCACTAGCCTTAAAAGAGTTAGGCTTGAAGGAAACCATATGACAGGAAATATAACAGAAGATTTTGGTGTATATCCTAATTTGGATTACATCGATTTGAGTGACAATAACTTTTATGGCTACCTTTCGCCAAACTGGGGGAAATGCTACAACCTGTCAAGCCTCAAGATCTCCAACAACAATTTATCTGGCAGCATACCACCGGAATTAGGTGAGGCAACTAACTTACATGTTCTTCACCTTTCTTCAAACCATCTTACAGGAGAACTTCCAATGGCCTTAAGCAAGTTGACTTCATTGATCGAGTTGTTTTTAAGCAACAATCATCTTTCAGGAAATTTTTCCATACAAATTGCTTCATTGCATGAACTTGCAAAGTTGGAGCTTGCTGCAAATAGTTTTAGTGGCTTCCTCACCGAACAACTTGGAAGGCTGCCTAAGCTATGGTACTTGAATTTGAGCCAAAATATGTTTGAGGGAAATATTCCTATTGAGTTTGGCCAATTAACAATTCTTCAAAGTCTTGATCTCGGTGACAATTTGTTGGATGGAACAATACCGGAAACACTAGGAGAGTTGAAATCCTTGGAAACATTGAACCTGTCACATAACAAGCTTTCTGGTGTCATTCCCTCTAGTTTTGATGAAATGTTAAGCTTGACAAATGTCGATATATCATACAACCATTTAGAAGGTCCACTTCCAAATATTCTGGCCTTCAGAAAAGCTCCAATTGAAGCACTAATAAACAATAAAGGTTTGTGTGGTAATGTCACTGGTATGGAGCCTTGCACAACGTCAAGTAGCAAATCTCATAACCATAAGGCTAAGAAAGTTTTACATCTAGTTTTACCCCTTACATTGGGCGTTGTAATACTAGCACTCTTTGCCTTAGGAACCTTTGGTTACACTGCTCCAGAACTTGCCTACACTATGGAAGTAAATGAGAAATGTGATGTTTATAGCTTTGGAATATTGGCCTTGGAAATACTTTTAGGAAAACATCCTAGAAATGTTACATCATCTACAGTGTCATCTTCTTCTGAAACAATGGTACTGGTCTCAACACTTGATAATTCCCCATTGAAGGATAAGTTGGATCAACGAATTCCTCATCCTACAGATTCAATTGCTGAGGAAGTGACATTGATTGTAAGGATAGCATGCGCATGCTTGAGTGAGAATCCACGTTCTCGGCCTACCATGGAGCAGGTGACCAAGAAACTTGTAATGCCCAGTTCAGCTCATTCAATGGATTAG 2646 0.3946 MTPTLLFTCFCAFVMATSLHVAGSSMNASYASATRQSSEAVSLLKWKASLDKESQVLLSSWNGNNPCKWVGITCDDESKSISKLTLMSMGLRGTLRSLNFSSLPNILAIVLRNNSLNGTVPNQIGVMSNLNSLDLSINQLSGSIPESIGNLSKLSCLNLSHSYLTGSIPSSIGMLVNISRLLLSNNQLSGPIPREIEKLINLRYLWLQDNDLSGSIPQEVGSMRMLFQLDFSMNYLSGRIPSTITNLSNLKYLYLYANSLSGAIPEDIGNLYSLTTIQLLANNLSGPIPPSIGNLVNLDSIHIWKNSISGSIPVTIKNLTKLTQLALYSNELSGPISSSIGDLVNLDSLHLEDNRFSGQIPSTIQNLTKLRILSLGSNEIFGPIPPSVGRLVNVEYISLMSNRLYGSIPSVIGNLTNLTSLQLAYNNFTGYLPHNICNNGKLENISIINNQVIGPVPKSLKNCTSLKRVRLEGNHMTGNITEDFGVYPNLDYIDLSDNNFYGYLSPNWGKCYNLSSLKISNNNLSGSIPPELGEATNLHVLHLSSNHLTGELPMALSKLTSLIELFLSNNHLSGNFSIQIASLHELAKLELAANSFSGFLTEQLGRLPKLWYLNLSQNMFEGNIPIEFGQLTILQSLDLGDNLLDGTIPETLGELKSLETLNLSHNKLSGVIPSSFDEMLSLTNVDISYNHLEGPLPNILAFRKAPIEALINNKGLCGNVTGMEPCTTSSSKSHNHKAKKVLHLVLPLTLGVVILALFALGTFGYTAPELAYTMEVNEKCDVYSFGILALEILLGKHPRNVTSSTVSSSSETMVLVSTLDNSPLKDKLDQRIPHPTDSIAEEVTLIVRIACACLSENPRSRPTMEQVTKKLVMPSSAHSMD* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1146 881 SUPERFAMILY Protein kinase-like (PK-like) 756 871 IPR011009 -
Dod01g1146 881 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 164 - -
Dod01g1146 881 PRINTS Leucine-rich repeat signature 130 143 - -
Dod01g1146 881 PRINTS Leucine-rich repeat signature 655 668 - -
Dod01g1146 881 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 761 877 - -
Dod01g1146 881 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 275 760 - -
Dod01g1146 881 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 164 - -
Dod01g1146 881 SUPERFAMILY RNI-like 373 697 - -
Dod01g1146 881 Gene3D Transferase(Phosphotransferase) domain 1 732 879 - -
Dod01g1146 881 Pfam Protein kinase domain 760 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1146 881 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 138 283 - -
Dod01g1146 881 SMART LRR_typ_2 343 366 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 655 678 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 127 151 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 367 391 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 247 271 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 199 223 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 631 654 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 415 439 IPR003591 -
Dod01g1146 881 SMART LRR_typ_2 559 585 IPR003591 -
Dod01g1146 881 SMART LRR_sd22_2 631 663 - -
Dod01g1146 881 SMART LRR_sd22_2 367 386 - -
Dod01g1146 881 SMART LRR_sd22_2 247 273 - -
Dod01g1146 881 SMART LRR_sd22_2 127 153 - -
Dod01g1146 881 SMART LRR_sd22_2 391 417 - -
Dod01g1146 881 SMART LRR_sd22_2 319 345 - -
Dod01g1146 881 SUPERFAMILY RNI-like 83 389 - -
Dod01g1146 881 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Dod01g1146 881 Pfam Leucine rich repeat 297 356 IPR001611 GO:0005515
Dod01g1146 881 Pfam Leucine rich repeat 634 692 IPR001611 GO:0005515
Dod01g1146 881 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 275 760 - -
Dod01g1146 881 Gene3D Ribonuclease Inhibitor 194 291 IPR032675 -
Dod01g1146 881 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 761 877 - -
Dod01g1146 881 Gene3D Ribonuclease Inhibitor 297 440 IPR032675 -
Dod01g1146 881 Gene3D Ribonuclease Inhibitor 441 731 IPR032675 -
Dod01g1146 881 ProSiteProfiles Protein kinase domain profile. 526 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1146 881 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 138 283 - -
Dod01g1146 881 ProSiteProfiles Leucine-rich repeat profile. 657 678 IPR001611 GO:0005515
Dod01g1146 881 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1146 Dod-Chr1 23225894 23229389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1146 26 786 Receptor kinase-like Gene Family AT4G08850 41.299 2.46e-171 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g1146 Pkinase 3.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1146 - - lja:Lj0g3v0203199.1 803.512