Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1145 ATGGAGCCCTGCACAACGTCAAGTAGCAAATCTCACAACCATAAGGCTAAGAAAGTTTTACATCTAGTTTTACCCCTTACATTGGGCGTTGTAATACTAGCACTCTTTGCCTTAGGTCTGTCATGTTTTCTCTACCAAAGTGCCAGCTTGAAGGAAAGAGAAGCCATAGAAACTCAAAGTCATGATGACAAGACGACGCATGATCAAAATTTATTTGCAATATGGAGCTATGATGGCAAGATGGTGTATGAGAACATTATTGAAGTCACAGAACAGTTTGACAACAAATACCTCATTGGAATTGGAGGGTATGGATCTGTTTACAGAGCTGAGTTGTCCACAGGTCAAGTTGTTGCTGTGAAAAAACTCCATTCAATACCAAATGAGGAAAATTGCAATCTAAAATCTTTTCAAAGTGAGATTCAAGCTTTGACAGAAATTCGACATCGTAACATTGTCAAACTATATGGGTTTTGTTCTCATCCACAATGCTCCTTTTTGGTTTATGAGTATGTAGAAAGGGGTAGCATGGATAAGATTCTAACCAATGATACGCAAGCAGCTGAATTTGATTGGAAAAGAAGGGTGAATGCTATTAAAGGAGTAGCTAAAGCTTTATGCTATATGCACCATGACTGTTCACCTCCGATTGTTCATCGGGACATATCTGCAAAAAATGTTCTCATAGATTTGGAATACGAGGCTCATGTTTCAGATTTTGGAACAGCTAAGTTTCTTAATCCAAATTCATCCAATTGGACCTCATTTGCAGGAACCTTTGGTTACGCTGCTCCAGAACTTGCCTACGGTATGGAAGTTAACGAGAAATGTGATGTTTATAGCTTTGGAATATTGGCCTTGGAAATACTTCTAGGAAAACATCATAGAAATGTTACATCATCTACATTATCATCTTCTTCTGAAACAATGGAACTGCTCTCAACGCTTGACAATTTCCCACTGAAGTTTAGGTTGGATCAACGAATTCCTCATCCCACGGATTCAATTGCCGAGGAAGTGACATTGATTGTAAGGATAGCATACGCATGCTTGAGCGAGAATCCACGTTTTCGCCCTTCCATGGAGCAAGTGACCAAGAAACTTGTAATGCCCAGTTCAGCTCATTCAATGGATTAG 1137 0.394 MEPCTTSSSKSHNHKAKKVLHLVLPLTLGVVILALFALGLSCFLYQSASLKEREAIETQSHDDKTTHDQNLFAIWSYDGKMVYENIIEVTEQFDNKYLIGIGGYGSVYRAELSTGQVVAVKKLHSIPNEENCNLKSFQSEIQALTEIRHRNIVKLYGFCSHPQCSFLVYEYVERGSMDKILTNDTQAAEFDWKRRVNAIKGVAKALCYMHHDCSPPIVHRDISAKNVLIDLEYEAHVSDFGTAKFLNPNSSNWTSFAGTFGYAAPELAYGMEVNEKCDVYSFGILALEILLGKHHRNVTSSTLSSSSETMELLSTLDNFPLKFRLDQRIPHPTDSIAEEVTLIVRIAYACLSENPRFRPSMEQVTKKLVMPSSAHSMD* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1145 378 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 374 - -
Dod01g1145 378 Pfam Protein kinase domain 95 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1145 378 ProSitePatterns Tyrosine protein kinases specific active-site signature. 217 229 IPR008266 GO:0004672|GO:0006468
Dod01g1145 378 SUPERFAMILY Protein kinase-like (PK-like) 73 368 IPR011009 -
Dod01g1145 378 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Dod01g1145 378 Gene3D Phosphorylase Kinase; domain 1 52 171 - -
Dod01g1145 378 Gene3D Transferase(Phosphotransferase) domain 1 172 376 - -
Dod01g1145 378 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 374 - -
Dod01g1145 378 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1145 Dod-Chr1 23181643 23183071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1145 1 265 Receptor kinase-like Gene Family AT4G08850 47.761 1.11e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g1145 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1145 - - gmx:100813639 483.411