Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1134 ATGATTGGCAATTGCTTTGGTGCCTTGAATTGGTGTAAAGGGAGAGATGATCCTGCTGGCCAACCACAGGAACAAGTGATAGCGACTACAAAGTTTAGCTATAATGCGTTGAGATCAGCAACTGGAGATTTCCATCCTTCAAGCAAAATCGGTGGAGGAGGTTATGGAGTCGTCTACAAGGGCGTTTTGAGAGATGGTACTCAAGTTGCCATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACCCATGAATTTATGACAGAAATTGATATGATATCAAATATACGGCATCCAAATCTTGTAGAACTAATTGGCTGCTGTGTTGAGGGTAGTCACCGAATATTGGTGTATGAATTTCTGGAGAACAATAGCCTTGCAAGTTCTTTGCTAGGTTCTGGAAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATTTGCTGTGGTACAGCTTCAGGTCTTAGGTTTCTTCATGAAGAGGCTGAACCAAATATTGTTCACAGAGATATCAAGGCCAGCAACATACTACTGGATGGGAACTATAATCCAAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCAGACAATGTCACCCATGTCAGTACTCGAGTTGCGGGAACTGTGGGATACCTAGCACCAGAATATGCACTTCTAGGACAGCTTACAAAGAAGGCGGATGTATACAGTTTTGGAGTTCTCATGCTTGAAATAATCAGCGGTAAAAGTAGTAGCAAGGCTGCATTTGGAGATAATCTTTTGGTTCTGGTGGAATGGGCTTGGAAGCTGAAAGAAGAAAACAGGCTTCTGGACATTGTTGATCCAGAACTAACCGAATACGACGAAAATGAGGTGTTGCGGTTCATTAAGGTTGCTCTGTTTTGCACCCAAGCTGCTGCTCGGCATAGACCTACCATGAAGCAAGTGCTGGAAATGCTCTCAAAGGAAGTGCATCTTAATGAGAAGGCATTGACTGAGCCTGGGATATACAGATGGTACACCTCTGGAAAGAAGGGCAGTTCTTTGAATGAGTCATCATCTTCTCAAGCATTCAAGCACATAAAATCTGAAATGCCAAATATAAACTCAATGAACTATAGTGGTAACGATATTATGACAGATATGCTTCCCAGGTAA 1140 0.4219 MIGNCFGALNWCKGRDDPAGQPQEQVIATTKFSYNALRSATGDFHPSSKIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTHEFMTEIDMISNIRHPNLVELIGCCVEGSHRILVYEFLENNSLASSLLGSGSKYVALDWPKRAAICCGTASGLRFLHEEAEPNIVHRDIKASNILLDGNYNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWAWKLKEENRLLDIVDPELTEYDENEVLRFIKVALFCTQAAARHRPTMKQVLEMLSKEVHLNEKALTEPGIYRWYTSGKKGSSLNESSSSQAFKHIKSEMPNINSMNYSGNDIMTDMLPR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1134 379 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1134 379 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 361 - -
Dod01g1134 379 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Dod01g1134 379 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1134 379 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Dod01g1134 379 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Dod01g1134 379 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Dod01g1134 379 Pfam Protein kinase domain 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1134 379 CDD STKc_IRAK 63 316 - -
Dod01g1134 379 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 361 - -
Dod01g1134 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1134 Dod-Chr1 22999196 23004772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1134 32 360 Receptor kinase-like Gene Family AT1G56120 50.149 3.13e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod01g1134 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1134 - - gmx:100785766 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1134 01 22999196 23004772 Dod01g1134 01 22999196 23004772 ECH