Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1125 ATGGCTTCCAGGGAGAGAAGAAGGGAGGCTCTTCAACAAAAGTTGCATCAACTTCAAGATGTCACAAACTACAGTGCTCTGAACAAAGCCTCAATAATTGTGGACGCAACTAGATATATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAACTCGGAGCTTGGTAAACCATCAACCATTGATGAACTACCAATGGTCACTGTGGGAACCCTAGAAAAGGGTTTCCTCATTACCGTGTATTCCGAAGAGAATTGCCCTGGTATGCTGGTCTCAATACTTAAAGCCTTTGAAGAACTGTGA 300 0.4367 MASRERRREALQQKLHQLQDVTNYSALNKASIIVDATRYIEELKQKVEGLNSELGKPSTIDELPMVTVGTLEKGFLITVYSEENCPGMLVSILKAFEEL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1125 99 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 57 IPR036638 GO:0046983
Dod01g1125 99 Coils Coil 33 53 - -
Dod01g1125 99 Gene3D - 2 57 IPR036638 GO:0046983
Dod01g1125 99 Coils Coil 1 21 - -
Dod01g1125 99 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 99 - -
Dod01g1125 99 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1125 Dod-Chr1 22419980 22443931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1125 6 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 33.721 1.99e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1125 - - vra:106759069 137.117