Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1121 ATGGGATCAAGCAGCTTTCTATGGAATTTTGCTAAAAAGTTCGTCACATTTGGGCTCATTACTGTGACGGTGTCTGATCGTTATGTGACTGTGGTTCCAGTTCGAGGTGGCTCTATGTCTCCCACATTTAATCCAAAAACTAGCACTTCTATGGGAAATTTTTCTGATGACTATGTCTTGGTTGAGAAATTCTGCCTTAGCAAATACAAGTTTTCACATGGAGACATTGTGGTTTTCCGCTCCCCATTGAATCACAAGGAGACACACATAAAGAGAATAGTCGCATTACCTGGTGAATGGTATGGCACTCGTCATAACTATGATGTGCTGAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGAGACAACGCAGCTTCTAGCATGGATTCGAAGTCATTTGGACCTATTCCTTTGGGTCTTGTTCGTGGAAGGGTGACCCATGTCGTGTGGCCTCCACAAAGGATAGGTGCTGTCTAG 477 0.4423 MGSSSFLWNFAKKFVTFGLITVTVSDRYVTVVPVRGGSMSPTFNPKTSTSMGNFSDDYVLVEKFCLSKYKFSHGDIVVFRSPLNHKETHIKRIVALPGEWYGTRHNYDVLKVPEGHCWVEGDNAASSMDSKSFGPIPLGLVRGRVTHVVWPPQRIGAV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1121 158 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Dod01g1121 158 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Dod01g1121 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod01g1121 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod01g1121 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod01g1121 158 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 158 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Dod01g1121 158 Pfam Signal peptidase, peptidase S26 8 99 IPR019533 GO:0004252|GO:0006465
Dod01g1121 158 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
Dod01g1121 158 Gene3D Umud Fragment, subunit A 26 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1121 Dod-Chr1 22165851 22167208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1121 39 158 MADS-box Gene Family AT1G29960 36.508 6.60e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1121 K09648 - gmx:100527429 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1121 01 22165851 22167208 Dod01g1121 01 22165851 22167208 ECH