Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1109 ATGGGAAAGGTAGCTGGTCCGCTACTCTCTCGAGTTGCAGGGAAAGAAATCACCCAACTTGGAGCAAGCAAGATGGCAGGTTCAGATCAGGCTTCAAATGGGAATGGCTCATTGAACAAATTGAAGCCAAGTGAGACCAGGGGGAAGACCATTACTTGCAAAGCTGCGGTGGCATATGGTCCGGGAGAGCCCTTCGTGGTGGAACAAGTTCTTGTTCACCCTCCTCAGAAAATGGAAGTTCGAATCAAGATCCTTTACACTTCTATATGTCACACCGATCTAAGCGCTTGGCAAGGCGAGAACGAGTCTCAGCGTGCTTATCCTCGGATTTTCGGCCATGAAGCTTCCTGGAGCGTGGGTGAAGGAGTGGGTGACGTGAAAGAAGGGGACCTAGTGGTGCCAATATTCAACGGTGAGTGTGGTGAGTGCTGCTATTGCAAGAGCGAGGGGACCAACATGTGTGAGAGGTTTGGTGTGAACCCAATGAAGAAGGTGATGGATGCAGATGGCACAAGCAGGTTCACCACAGCACAAGGCAAACCCATCTTCCATTTCTTGAACACATCAACTTTCAGTGAGTACACCGTTGTGGACTCAGCCTGTGTGGTCAAGCTCCACCATGACCTCGCCCCGAGCCTCAAAAGCCTCGCCTTGATCAGCTGCGGTGTATCCACAGGAGTTGGAGCTGCTTGGAATAGTGCTAATGTGCAGTCTGGTTCCTCTGTGGCGGTCTTTGGCTTAGGAGCCGTGGGGCTAGCTGTCGCAGAAGGAGCACGAGCCAGAGGTGCATCCAGAATAATAGGTGTGGACATCAACCCAGGCAAATTCATCAAAGCCCGAGCTATGGGAATCACAGACTTCATAAATCCAAGGGATGATGAGAAGCCAGTATATGAGATAATCAGAGAAATGACTGGAGGCGGTGTACACTACAGTTTTGAATGTGCTGGGAACTTGGAAGTTCTAAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTAATACTAGGAATTCACTCAACCCCACAGTTGCTTCCCATTCATCCAATGGAGTTGTTCGTTGGTCGCAGAATTATAGGATCAGTCTTCGGAGGTTTCAAAGGGAAAAGTCAGTTGCCCCATTTTGCCAAAGATTGCATGAATGGAGTGGTGAAGCTGGACAATTTCATCACTCACGAGCTTCCCTTTGAGGAGATTAACAAAGCCTTCGATCTTCTGATCACTGGAAAGTCACTTAGATGCCTTCTGCAGCTCTAA 1266 0.4929 MGKVAGPLLSRVAGKEITQLGASKMAGSDQASNGNGSLNKLKPSETRGKTITCKAAVAYGPGEPFVVEQVLVHPPQKMEVRIKILYTSICHTDLSAWQGENESQRAYPRIFGHEASWSVGEGVGDVKEGDLVVPIFNGECGECCYCKSEGTNMCERFGVNPMKKVMDADGTSRFTTAQGKPIFHFLNTSTFSEYTVVDSACVVKLHHDLAPSLKSLALISCGVSTGVGAAWNSANVQSGSSVAVFGLGAVGLAVAEGARARGASRIIGVDINPGKFIKARAMGITDFINPRDDEKPVYEIIREMTGGGVHYSFECAGNLEVLRDAFLSAHEGWGLTVILGIHSTPQLLPIHPMELFVGRRIIGSVFGGFKGKSQLPHFAKDCMNGVVKLDNFITHELPFEEINKAFDLLITGKSLRCLLQL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1109 421 SUPERFAMILY GroES-like 46 230 IPR011032 -
Dod01g1109 421 Gene3D - 56 416 - -
Dod01g1109 421 PANTHER ALCOHOL DEHYDROGENASE 46 420 - -
Dod01g1109 421 Gene3D - 226 364 - -
Dod01g1109 421 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 46 420 - -
Dod01g1109 421 SUPERFAMILY GroES-like 371 419 IPR011032 -
Dod01g1109 421 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 213 385 IPR036291 -
Dod01g1109 421 Pfam Zinc-binding dehydrogenase 249 368 IPR013149 -
Dod01g1109 421 MobiDBLite consensus disorder prediction 24 43 - -
Dod01g1109 421 Pfam Alcohol dehydrogenase GroES-like domain 79 204 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1109 Dod-Chr1 21946486 21955566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1109 79 409 Monolignol Biosynthesis Gene Families AT2G21730 27.647 4.52e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1109 K00001 - gmx:100787307 616.305