Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1107 ATGGGGTCTCAACAACAACAAGAGCCATGGCATTTGGAGAATGGGAAGGTGCTGACCAAGGAGATGAGGCATGGCCGCACGGCACACAACATGTCCTCATCCTCCTTGAGAAAGAAGTCTAACCTGACCCTTGTCTCCAGGATCAACTGTGCACTGCTCAGGAACCTGCTGATTAATTTTCAAGAAGTTATTCTTGGCACCAAGTTGTCCGTATTGTTCCCTGCTATTCCCATCGCCATCATTGCTCAATGTTATGGTCTTGGAAGACCGTGGGTTTTTGCACTGAGCCTACTTGGGCTTACCCCTCTTGCTGAGCGTGTCAGCTTCCTCACAGAACAAGTTGCTAATTACACAGGTCCTACAGTTGGAGGACTTCTGAATGCAACGTGTGGGAATGTAACTGAGCTCATAATAGCAATATTTGCACTTAGCAATGGCAAAATTGCTGTGGTCAAGTATTCTCTCTTGGGTTCCATCCTTTCAAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTGGTGGCATTGCAAACCTTGGTTTGGAAAAAAAATATGACAGAAGACAAGCAGACGTGAACTCACTTATGCTGATTTTGGCATTGTTGTGCCACTTGCTTCCATTGCTGTTCAGATATGGTGGTGGCTCAGCTGCTCTCACTGCAGATGCATCACTTCACTTGTCAAGAGCTGCTAGCGTTACAATGCTGATTGCATATTTTGCTTACCTTGTCTTTCAACTTTGGACACACAGGCAATTATTTGAAGATGAAGCTCAAGATGGAGATGGTGGCAATGGTTCAGATGAACAAACTGTGATTGGATTCTGGAGTGGCATTGCTTGGCTGGTTGGGATGACTGTATTCATTGCTTTGTTGTCTGAATATGTGGTGGACACAATTGAGGAAGCATCAGATTCATGGGGTCTATCAGTCAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTAGGTTCTGCAACTCAAATTGGCATGTTTGTGGTTCCCGTATGTGTGGTGGTTTCATGGATTATGGGTATCAAAATGGACCTGAACTTCAACCTCATAGAGACAGGTTCTCTTGCTTTGGCAATAATAGTCACAGCCTTCACTTTACAGGATGGTACATATCACTACATGAAAGGCCTTATTCTTCTACTCTGCTATGTTGTCATTGGGGCTTGCTTCTTTGTACAAAGAACACCATTGAACACACAGAACGCTACCAACATCACGCTTAAATCAGCAACTGATGCAGCTTTAAGCGCTTAG 1344 0.4435 MGSQQQQEPWHLENGKVLTKEMRHGRTAHNMSSSSLRKKSNLTLVSRINCALLRNLLINFQEVILGTKLSVLFPAIPIAIIAQCYGLGRPWVFALSLLGLTPLAERVSFLTEQVANYTGPTVGGLLNATCGNVTELIIAIFALSNGKIAVVKYSLLGSILSNLLLVLGTSLFCGGIANLGLEKKYDRRQADVNSLMLILALLCHLLPLLFRYGGGSAALTADASLHLSRAASVTMLIAYFAYLVFQLWTHRQLFEDEAQDGDGGNGSDEQTVIGFWSGIAWLVGMTVFIALLSEYVVDTIEEASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIGMFVVPVCVVVSWIMGIKMDLNFNLIETGSLALAIIVTAFTLQDGTYHYMKGLILLLCYVVIGACFFVQRTPLNTQNATNITLKSATDAALSA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1107 447 TIGRFAM cax: calcium/proton exchanger 74 421 IPR004798 GO:0006816|GO:0015369
Dod01g1107 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod01g1107 447 Gene3D - 120 260 IPR044880 -
Dod01g1107 447 Gene3D - 264 421 IPR044880 -
Dod01g1107 447 TIGRFAM caca2: calcium/proton exchanger 55 421 - -
Dod01g1107 447 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016021|GO:0055085
Dod01g1107 447 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016021|GO:0055085
Dod01g1107 447 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1107 Dod-Chr1 21908939 21913196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1107 8 426 Antiporters AT2G38170 68.837 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1107 K07300 - gmx:100779440 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1107 01 21908939 21913196 Dod01g1107 01 21908939 21913196 ECH
Dod01g1107 01 21908939 21913196 Dod07g1524 07 41583986 41588316 PCT