Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1094 ATGGGTTCTTCTAGTCGCTCAGATGGCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACAAGAACTTCATGATCGATTTGTGGAGGCTGTGAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAAGGTATATTGAAGGGAATGAAGGCTATGGGTGTTTCTAAATTAAACATTTATCACGTCAAAAGTCACCTGCAGAAATACCGGATCTCCAAACTGATTCCAGAGTCTACCACAAGAAAGCTTGAGAAGAGAAGCATATCAGATATACTGCCAAATTTCAGTTCTATAACTGCTCTTCAGCTAAAGGAAGTTCTTCAAGTGCAGATGGAGGTGCAAAACCGCCTGAGTGATCAAGTAGAGGTTCAGAGAAGCTTGAAGCTAAAAATTGAAGCACAAGGTAAATACCTGGAGAGAATTGGACAAAATCATCACAACAGAACAATCACTAGAAAAGCTTGCAAGCCATTTGCTGCTAGTGGTCCACCCCTGCCTTCTCTCTCTGAGGAGTCAGAATCTTTGAAAACACAGCCTAAAGAAGAGCATGGATCAGCCAAAAAGAAAAGGGTAGTGGAGGAGGGTTTTTTTCCAACAATTATATCATCCACCACCACAGAATTCTACAACCAAACCTGGGATCTTTCATGGAGCCAGCTTGCAGAAGCATGCCAATCGCCTTTGATGCCCGGATTCTTATTATAA 705 0.4355 MGSSSRSDGSANGKERLRWTQELHDRFVEAVNRLGGPDRATPKGILKGMKAMGVSKLNIYHVKSHLQKYRISKLIPESTTRKLEKRSISDILPNFSSITALQLKEVLQVQMEVQNRLSDQVEVQRSLKLKIEAQGKYLERIGQNHHNRTITRKACKPFAASGPPLPSLSEESESLKTQPKEEHGSAKKKRVVEEGFFPTIISSTTTEFYNQTWDLSWSQLAEACQSPLMPGFLL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1094 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 189 - -
Dod01g1094 234 Gene3D - 13 74 - -
Dod01g1094 234 MobiDBLite consensus disorder prediction 174 189 - -
Dod01g1094 234 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 72 IPR006447 GO:0003677
Dod01g1094 234 MobiDBLite consensus disorder prediction 154 189 - -
Dod01g1094 234 Pfam MYB-CC type transfactor, LHEQLE motif 102 144 IPR025756 -
Dod01g1094 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 189 IPR044848 GO:0003700
Dod01g1094 234 Pfam Myb-like DNA-binding domain 17 70 IPR001005 -
Dod01g1094 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 74 IPR017930 -
Dod01g1094 234 SUPERFAMILY Homeodomain-like 14 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1094 Dod-Chr1 21623756 21627613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1094 14 160 G2-like Transcription Factor Family AT1G79430 46.358 5.67e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod01g1094 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1094 - - pvu:PHAVU_008G103100g 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1094 01 21623756 21627613 Dod01g1094 01 21623756 21627613 ECH