Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1091 ATGGGCAATTGCTGCAGATCTCCGGCCGCCGTCGCCCGCGAGGACGTCAAATCCAGCTTCTCCGACCACCACGCCAAGCGCGCCGCCGCAGCAGCCGGAGACTCCTCCTCGGCCATCTCCGGCGCCGGCGGCAAGAAGAAGCACCCTCCTCCTCCGATCACCGTCCTCACCGGCGTCCCAAAGGAGAACATCGAGGACCGGTACCTCGTGGACCGCGAGCTCGGCCGCGGCGAGTTCGGCGTGACGTACCTCTGCATCGACCGCGACACGCGCGAGCTGCTCGCGTGCAAGAGCATCTCGAAGCGGAAGCTCCGCACCGCCGTGGACGTCGATGACGTCCGCCGCGAGGTCGCTATCATGCGCCACCTGCCGCAGAGCTCGTCAATTGTGGCGCTCCGGGAGGCCTGCGAGGACGACAATGCTGTTCACCTAGTCATGGAGCTCTGTGAGGGTGGCGAGCTCTTCGACCGCATCGTCGCCAGGGGGCATTACACTGAGCGTGCTGCCGCCGCGGTGGCGAGGACGATCGTGGAGGTCGTGCAGCTGTGTCATAAGCATGGGGTTATCCATAGGGACCTCAAGCCTGAGAATTTCTTGTTTGCTAACAAGAAGGAGAACTCGCCGCTCAAGGCAATTGATTTCGGATTGTCGATATTCTTCAAGCCAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGGCCAGAAATAGATATATGGAGTGCGGGAGTAATTCTTTATATTTTATTGTGTGGCGTTCCCCCATTTTGGGCTGAATCTGAACAAGGGGTTGCACAGGCCATTCTTCGAGGGCTTATAGATTTCAAACGAGAACCGTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTCGGCAAATGTTAGAGCCAGACCCTAAGCTTCGATTAACTGCCAAACAAGTCCTCGAGCATCCTTGGCTGCAAAATGCTAAAAAGGCTCCCAATGTTCCTCTTGGAGATGTTGTTAAGTCAAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTTAGGGTTATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGATATCAAAGATATGTTCAAGAAGATGGATAGTGATAATGATGGTATTGTTTCCATTGAAGAACTGAAAGCTGGATTTCAAAATTTTGGATCCCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTAGATAATAATGGGAAGGGAACACTTGACTATGGAGAATTTGTCGCTGTTTCTCTTCATTTAAAAAGGATGGCTAATGATGAGCATCTCCGGAAGGCCTTCTCATATTTTGACAAGGATGGGAATGGATATATTGAACCAGATGAGCTAAGGAATGCCTTGATGGAAGATGGACCAGATGATTGTACAGATGTAGCAAATGATATTTTCCAGGAAGTAGACACGGACAAGGATGGACGTATAAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAAGCATCTAGGCATTACTCACGAGGGAGGTTCAACAGCTTGAGCTTAAAGTTGATGAAAGATGGTTCTTTAAACTTAGGAAATGAAGTAGTTGTCTGA 1638 0.4945 MGNCCRSPAAVAREDVKSSFSDHHAKRAAAAAGDSSSAISGAGGKKKHPPPPITVLTGVPKENIEDRYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVDDVRREVAIMRHLPQSSSIVALREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKDMFKKMDSDNDGIVSIEELKAGFQNFGSQLAESEVQMFIEAVDNNGKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRNALMEDGPDDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNEVVV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1091 545 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Dod01g1091 545 Pfam Protein kinase domain 70 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1091 545 SUPERFAMILY Protein kinase-like (PK-like) 50 351 IPR011009 -
Dod01g1091 545 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Dod01g1091 545 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Dod01g1091 545 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Dod01g1091 545 CDD STKc_CAMK 67 325 - -
Dod01g1091 545 SMART serkin_6 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1091 545 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Dod01g1091 545 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 41 523 - -
Dod01g1091 545 ProSiteProfiles EF-hand calcium-binding domain profile. 477 512 IPR002048 GO:0005509
Dod01g1091 545 SUPERFAMILY EF-hand 355 533 IPR011992 -
Dod01g1091 545 MobiDBLite consensus disorder prediction 16 54 - -
Dod01g1091 545 CDD EFh 445 507 IPR002048 GO:0005509
Dod01g1091 545 Pfam EF-hand domain pair 444 507 IPR002048 GO:0005509
Dod01g1091 545 Pfam EF-hand domain pair 372 432 IPR002048 GO:0005509
Dod01g1091 545 Gene3D - 335 510 - -
Dod01g1091 545 ProSiteProfiles Protein kinase domain profile. 68 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1091 545 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Dod01g1091 545 Gene3D Phosphorylase Kinase; domain 1 69 153 - -
Dod01g1091 545 Gene3D Transferase(Phosphotransferase) domain 1 154 334 - -
Dod01g1091 545 SMART efh_1 481 509 IPR002048 GO:0005509
Dod01g1091 545 SMART efh_1 409 437 IPR002048 GO:0005509
Dod01g1091 545 SMART efh_1 373 401 IPR002048 GO:0005509
Dod01g1091 545 SMART efh_1 445 473 IPR002048 GO:0005509
Dod01g1091 545 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Dod01g1091 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 523 - -
Dod01g1091 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1091 Dod-Chr1 21498868 21503572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1091 1 539 EF-hand Containing Proteins AT1G74740 67.532 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod01g1091 Pkinase 1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1091 K13412 - gmx:100793170 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1091 01 21498868 21503572 Dod01g1091 01 21498868 21503572 ECH