Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1088 ATGGGAGGAGGCAATGGACAGAAGTCCGAAATGGCTTGTGAGAAGAACATGGAGGAAAATAAACCTCCAAACGAAGCCAGCTTGAGCCGAATAAGAAGGCATGACCATCCAGAATACAAAAGGGTACCTTGCAGATACTGCGGCTATAACATTGTAGCTAAGGTCCACGAACGCAGCTATAACCCTCACTGCTTGGCCATTATCATTCTCTATGTTGGTGGAACATATGACGTAACTGCCGTTCAGCTGTGGCAGGAAGACTGCCAAGAATGGAGGCCAATGTGCAGAGCCTTTGGAATGGCGTTTTATGCTGAAAACCCGCCAAGGGGTAACATTAGGTTCAAGTTACAATTAAGTGGCAGTGCAGGGCTGTATTGGGTAGAGTCCAAGAATGTTATCCCCAGCGATTGA 411 0.472 MGGGNGQKSEMACEKNMEENKPPNEASLSRIRRHDHPEYKRVPCRYCGYNIVAKVHERSYNPHCLAIIILYVGGTYDVTAVQLWQEDCQEWRPMCRAFGMAFYAENPPRGNIRFKLQLSGSAGLYWVESKNVIPSD* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1088 136 Pfam Expansin C-terminal domain 53 134 IPR007117 -
Dod01g1088 136 SUPERFAMILY PHL pollen allergen 52 136 IPR036749 -
Dod01g1088 136 MobiDBLite consensus disorder prediction 12 34 - -
Dod01g1088 136 Gene3D - 43 136 IPR036749 -
Dod01g1088 136 PANTHER BNAC07G34020D PROTEIN 37 136 - -
Dod01g1088 136 PANTHER EXPANSIN-B3 37 136 - -
Dod01g1088 136 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 63 136 IPR007117 -
Dod01g1088 136 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1088 Dod-Chr1 21444437 21447243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1088 38 136 Expansin Gene Family AT4G17030 57.576 2.35e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1088 - - gmx:100802855 159.844