Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1087 ATGGAGGGTCACCATCTCCATCATCATCATCAAAGGCAACAACAACAACATCATCAACAACAACAACTACAACAACAACATCATAGTGTTAACGTTGATGTCACTGATAGGTTCCCTCAATGGAGCATCCAAGAGACAAAGGAGTTCTTAACGATCCGAGCAGAGCTGGATCAGGCTTTCATGGAGACAAAGAGGAACAAGCAGCTTTGGGAAGTCATCTCCACCACGATGAAGGAAAAGGGTTACAATAGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTACAAGGGATGTGAAACAATGGAAGCAGAAGCGTTAAGGCAGCAATTTCCGTTTTACAATGAGCTTCAAGCGATTTTCACTGCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAAGGAGGGTCCAATAAGAAGAAAGCCACGCAACTATCTTCTGAGGATGAAGACGATGGTAATGAAGAGAGTGAAGGAGACCACAAGGGTATCGGCAGAAAGAAAAAGAAGAAGGGTAAGATGGTGAGTGGTGGTAATGGTAGTGGTAGCAGTAGTAATAACAGTTTGAATCATCTGAAGGAGATTCTGCAGGAGTTCATGAGGCAACAAATGCAAATGGAGGCTCAGTGGATGGAAGCATTTGAGGCGAGGGAGAATGAGAGGAGGTTGAAGGAGTTGGAGTGGAGGCAAACCATGGAGGCATTAGAGAATGAGAGGATAATGATGGACCAGAGATGGAGAGAGAGGGAAGAGCAAAGGAGGATCAGGGAAGAAGCTAGGGCTGACAAGAGAGATGCTCTAATCACAGCACTACTTAACAAGCTAAGAAGAGAAGAGATGTAG 855 0.4561 MEGHHLHHHHQRQQQQHHQQQQLQQQHHSVNVDVTDRFPQWSIQETKEFLTIRAELDQAFMETKRNKQLWEVISTTMKEKGYNRSPEQCKCKWKNLVTRYKGCETMEAEALRQQFPFYNELQAIFTARMQRMLWAEAEGGSNKKKATQLSSEDEDDGNEESEGDHKGIGRKKKKKGKMVSGGNGSGSSSNNSLNHLKEILQEFMRQQMQMEAQWMEAFEARENERRLKELEWRQTMEALENERIMMDQRWREREEQRRIREEARADKRDALITALLNKLRREEM* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1087 284 ProSiteProfiles Myb-like domain profile. 41 97 IPR001005 -
Dod01g1087 284 Pfam Myb/SANT-like DNA-binding domain 40 124 IPR044822 -
Dod01g1087 284 MobiDBLite consensus disorder prediction 1 15 - -
Dod01g1087 284 MobiDBLite consensus disorder prediction 137 192 - -
Dod01g1087 284 Coils Coil 193 213 - -
Dod01g1087 284 CDD GT1 39 104 - -
Dod01g1087 284 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 282 - -
Dod01g1087 284 MobiDBLite consensus disorder prediction 1 28 - -
Dod01g1087 284 Gene3D - 41 102 - -
Dod01g1087 284 PANTHER - 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1087 Dod-Chr1 21343197 21345449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1087 16 282 Trihelix Transcription Factor Family AT2G38250 55.636 1.78e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod01g1087 Myb_DNA-bind_4 3.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1087 - - gmx:100794230 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1087 01 21343197 21345449 Dod01g1087 01 21343197 21345449 ECH