Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1079 ATGACTGAGGCTGCATCATTCGAGGAATTTTTCCAAGGCTGGCTGGAACGCCAAAGGAACTACCATTCAGAGCTTGTCTTGGCACAGCAACACCGAAACGAGCTTCAAGATTCCGATAGAAGGGAATTGGTAAACAGGGTACTCTGCCACTACGAGCAATACTTTGAAGAGAAATCAAAGGTTGCCCACCACAACGTTCTCCTTGTTTTCTCGCCACCATGGTTCAGTTCACTCGAGAGAACGCTTCTTTGGGTTGCGGGGTTCAAGCCAGGAACAGCATACCATATTGTGGAATCCTCTGTTGAGGACTTAACAGAGGATCAGAGGCAGAGGCTGAGCATGCTTAGCCATGAGACAAAGATGAAGGAGAGGGACCTCAATGATGAGCTGGCGAAGGTTCAGGAGAGCGTGGCGGCGCCGCCGCTCGTTGAGATGGCGAGGAGCCATGGGAGGAGGCCAGCAGAGGAGGGTGGTGGTGAAGATGTTCCAAGTGATTTCCAGGTTGCACTAGCGAACATTGTGGCAAGTGCTGATGCATTGAGGACAAACACAGCCTTGAGGGTTGTGCAGATTCTGAGGCCAGATCAGGCTGTTGTTTTCTTTGCTGCTGTTGGTGAGCTTCAGCTCAGGATCAGGTCTTTGGGTTTTGATAAGGATGCACAAAGTGGAGGAAGCCATGTTTGA 684 0.5073 MTEAASFEEFFQGWLERQRNYHSELVLAQQHRNELQDSDRRELVNRVLCHYEQYFEEKSKVAHHNVLLVFSPPWFSSLERTLLWVAGFKPGTAYHIVESSVEDLTEDQRQRLSMLSHETKMKERDLNDELAKVQESVAAPPLVEMARSHGRRPAEEGGGEDVPSDFQVALANIVASADALRTNTALRVVQILRPDQAVVFFAAVGELQLRIRSLGFDKDAQSGGSHV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1079 227 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 4 223 - -
Dod01g1079 227 Pfam Seed dormancy control 29 98 IPR025422 GO:0006351|GO:0043565
Dod01g1079 227 PANTHER - 4 223 - -
Dod01g1079 227 ProSiteProfiles DOG1 domain profile. 4 221 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1079 Dod-Chr1 21229450 21231683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1079 4 214 bZIP Transcription Factor Family AT1G08320 29.224 1.19e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1079 - - gmx:100780874 296.204