Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1060 ATGCGTGTTGGCACACAAAATTGCCACGTGTACGTAACGGCCTTAACCTCGAAGCATCTGGACTTTACCCCGCGAACTTATTTAATCGTTACGTGGTTTTGTCGTCCCTCCATCACCGTCACTTTGTCTGTCCTCTCTGGTCATCGTCTTCTCAGAAACGCTACGCTCCGATTCCACAATTCCAAAAAGAGTTTCTCCAGCAAAGATTATTCGGATCCGGGTATGAGGACCCGTTCACCGAAATGGGTCATTCTCCTCGTGGCCACTCTCTGCTTCCTTGCGTGCCTCGTAAGCGAAGCCAAAACCATCGACCCATACAAGGTTCTTGGGGTTGATAAGAATGCAAGTCAGCGAGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTCCAGTATCACCCTGACAAGAACAAAGCCAAGGGGGCACAAGAGAAGTTTGCGCAGATCAATAATGCATATGAGATTTTATCTGATGAACAGAAGAGGAAGAATTATGACCTTTATGGAGATGAAAAAGGCAATCCTGGATTTGAAGCAGGCCATCCTGGAGATCAAGGCGGGTATACTTATTTCACGGGTGGTGGACCCGGACAAAGCCAGTATAACTTCAGACCAGGTGACTGGCAGGGTATGGGAGGGCAAGGAGGATCCAAGTCATTCTCTTTTTCCTTTGGTGGGTCTGGTGGTCGAGGTTCTTTTGGATTGGATTTGAATGATATCTTTGGTAGTTTTTTTGGTGGAGGAGGAGGAGGAGGTGGTGGTGGGAGTCAGTTTGGGGGTTTTGGCAGTTCGACTGGCTCTCAGTTTGGGTCCAAGAGAACCCCCAAAAGCTTTAAAGCCATAAATTCACAGATATACGAGAAAGAAATATTTGATCAAGGGATGACTTGGCTTTTGTTATCTTATACACCTTCATTGCAGGGGATCCAATACTTTGAATCCGCTGTAGAGGAGGTTTCCAGTTCATTGCAAGGAGCATTTAAGGTCGGAAGCATTAACTGTGAAGAGGAAGACTCATTCTGTAAGGAGATTGGTTTGTATCCACGCAGAGCTCCAAGGCTTTTTGTTTTTTCTTACAAGGAGAATGAAAAGGGCTCTCTGGTGGAATATCGTGGTAACTTGGCTGCTAAGGATTTGAAGGCTTTCTGTCAAGAGCACTTGCCTAGGTTTTCAAAACGGACTGACTTGAACAACCTTGATCAATTTAGCACTACTGGAAAGTTGCCTAGGGTGATTCTTCTCTCCACCAAGAAGGACACTCCTGTAATTTGGCGTGTTCTTTGTGGTTTGTATCACAAACGCATTGCTTTCAGTGATGCACAGGTCCATGATGTTTCTGATCCAAGAGTGAAAAGGCTAGGAGTTGATGCACTTCCAGCTATTGTAGGTTGGCTACCTAATGGAGAGAAGCGCATTTTGAAATCCGGGATTTCTGTAAAAGATTTGAAATCTGCAGTTCTTGGTCTTAGTAATGTACTTGAAAGTTTTGAAAAAACAAGTAAAAGGGAAGCATCAGGTCAGGCCAAGAAGGTACGAACTGATTCAGACGAGGGACACATACAGTTGCTTTCACGGTCTAACTTTGAGGTTGTTTGTGGTGAGAAAGCTCCAGTCTGCATCATTGGTGCCTTCAGGTCTTCTAAAGCTAAAGAAAAGCTGGAATCAATTCTCTCTGTCGTCTCCCAAAAATCTCTTTCAAGGCGACCAAATCAAGGAGGCAGCTCGAGGGACTCCATTTCCTACGCGCTCTTGGATGCTGCAAAGCAAGAATCATTTCTAAATGCATTCAACAAGACAAGTTATAAATCATCAGATAAGTTGTTGATTGCCTACAAGCCCCGGAGAGGGAAGTACACTGTATATATGGGCGATATGACAATAGAGGACGTTGAGAATTTCATCAGCTCCGTTCTCAGTGGAGATATACCCGTCAGGGAAACACGTGCGAAACCTGTGCTCAAGTAG 1962 0.4495 MRVGTQNCHVYVTALTSKHLDFTPRTYLIVTWFCRPSITVTLSVLSGHRLLRNATLRFHNSKKSFSSKDYSDPGMRTRSPKWVILLVATLCFLACLVSEAKTIDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFEAGHPGDQGGYTYFTGGGPGQSQYNFRPGDWQGMGGQGGSKSFSFSFGGSGGRGSFGLDLNDIFGSFFGGGGGGGGGGSQFGGFGSSTGSQFGSKRTPKSFKAINSQIYEKEIFDQGMTWLLLSYTPSLQGIQYFESAVEEVSSSLQGAFKVGSINCEEEDSFCKEIGLYPRRAPRLFVFSYKENEKGSLVEYRGNLAAKDLKAFCQEHLPRFSKRTDLNNLDQFSTTGKLPRVILLSTKKDTPVIWRVLCGLYHKRIAFSDAQVHDVSDPRVKRLGVDALPAIVGWLPNGEKRILKSGISVKDLKSAVLGLSNVLESFEKTSKREASGQAKKVRTDSDEGHIQLLSRSNFEVVCGEKAPVCIIGAFRSSKAKEKLESILSVVSQKSLSRRPNQGGSSRDSISYALLDAAKQESFLNAFNKTSYKSSDKLLIAYKPRRGKYTVYMGDMTIEDVENFISSVLSGDIPVRETRAKPVLK* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1060 653 PRINTS DnaJ domain signature 140 160 IPR001623 -
Dod01g1060 653 PRINTS DnaJ domain signature 160 179 IPR001623 -
Dod01g1060 653 PRINTS DnaJ domain signature 106 124 IPR001623 -
Dod01g1060 653 PRINTS DnaJ domain signature 124 139 IPR001623 -
Dod01g1060 653 ProSiteProfiles dnaJ domain profile. 104 168 IPR001623 -
Dod01g1060 653 CDD DnaJ 104 157 IPR001623 -
Dod01g1060 653 Coils Coil 138 158 - -
Dod01g1060 653 PANTHER DNAJ PROTEIN ERDJ3A 80 653 - -
Dod01g1060 653 SUPERFAMILY Thioredoxin-like 518 642 IPR036249 -
Dod01g1060 653 Gene3D DnaJ domain 101 257 IPR036869 -
Dod01g1060 653 ProSitePatterns Nt-dnaJ domain signature. 145 164 IPR018253 -
Dod01g1060 653 SUPERFAMILY Thioredoxin-like 280 386 IPR036249 -
Dod01g1060 653 Gene3D Glutaredoxin 274 396 - -
Dod01g1060 653 PANTHER DNAJ PROTEIN ERDJ3A 80 653 - -
Dod01g1060 653 Pfam DnaJ domain 104 165 IPR001623 -
Dod01g1060 653 SUPERFAMILY Chaperone J-domain 94 172 IPR036869 -
Dod01g1060 653 SMART dnaj_3 103 160 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1060 Dod-Chr1 20977921 20981911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1060 106 167 C2H2 Transcription Factor Family AT1G74250 42.647 4.91e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1060 - - adu:107484989 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1060 01 20977921 20981911 Dod01g1060 01 20977921 20981911 ECH