Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1053 ATGATTTTCACTATCCAATCTCCAAGGCAAGAATTAGCAGAGAGGCTTGAAAAAGTTGTGGTTGATATAGCTATCATAGATATGAGGATGGAAGAAGGCCATCGTGGCTCAGAATGTTCCAAGACAAGCCCTTCTAAGGAAGATGGTGATTGTGAAGAGAGTGAGGCCACTGAAGGTGAGAGCAATAAGCAAAACAACAACAATGGAGGAGGGAGCTCAAGCAACAGCACAGTGGAAAAGAATGAGAAGAAGACTTCAGTGAGGCCTTATGTTAGATCCAAGCTGCCAAGGCTACGTTGGACGCCTGATCTTCACCTTAGATTTATTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAGTTGGTTCTTCAACTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGATGACACAAATCAAGCATTGGGTGACCATAGGCTTCTTGTAGAAAGTGGAGACAGAAATGTTTATAACCTCAGCCAGCTTCCCATGCTTCAAGGCTATAATCCAAGCCAAAGTTCAGCCTATAGATATGGATATGGAGGTGCTTCTCTTGACGGTGTCTGTGAAAAGATGGTGCATAGGCGGCCTTTCATGGATCGGAGTTCAGTGGATGAATCTGGGGCTGGATTTTATGGCAGAATGGCTGAGAGGATCTATGGGAACAACAATAACATCAATTGGACACACAGCAATTTCCAAGTAGCTTCCTCCAATTTTGTTGAACTATCAACAAGCCATGAACCAAAAGATCAGTTCCTGTCATTTGGTGGCCATGAATCTTTATGCCCAAGGACTAGATTGAGCCAGAATATTGATCTTAATCCACCAAGCCAAGTAAAACCAATAGGAGCTCAAGAGCTCATCCCCAACAGCACTAAATTGCTTGCAAATCCATTAGATTTGGAACTGAAGAAGGCCATGAAAAGGAAGACTTCAGATATTGACCTTGATTTGGATCTGTCTCTTAAACTAAATTCAAGGGTCACTTTTGAGAACCAAGGAACCATGGAGGAACATGAAGTTGATAGCAATCTATCACTCTCTTTGCACTCTCAATCCTCTTCCCCATATCATAGCAGCAGGTTCAACGAAGCACAACATCACCATTGTAAGCAAGGCAAAAGGGCCAGTGGTTTGGATCTGACTATCTGA 1206 0.4262 MIFTIQSPRQELAERLEKVVVDIAIIDMRMEEGHRGSECSKTSPSKEDGDCEESEATEGESNKQNNNNGGGSSSNSTVEKNEKKTSVRPYVRSKLPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDTNQALGDHRLLVESGDRNVYNLSQLPMLQGYNPSQSSAYRYGYGGASLDGVCEKMVHRRPFMDRSSVDESGAGFYGRMAERIYGNNNNINWTHSNFQVASSNFVELSTSHEPKDQFLSFGGHESLCPRTRLSQNIDLNPPSQVKPIGAQELIPNSTKLLANPLDLELKKAMKRKTSDIDLDLDLSLKLNSRVTFENQGTMEEHEVDSNLSLSLHSQSSSPYHSSRFNEAQHHHCKQGKRASGLDLTI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1053 401 MobiDBLite consensus disorder prediction 32 90 - -
Dod01g1053 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 36 401 IPR044848 GO:0003700
Dod01g1053 401 Gene3D - 95 152 - -
Dod01g1053 401 PANTHER - 36 401 - -
Dod01g1053 401 MobiDBLite consensus disorder prediction 357 379 - -
Dod01g1053 401 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Dod01g1053 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Dod01g1053 401 MobiDBLite consensus disorder prediction 32 50 - -
Dod01g1053 401 MobiDBLite consensus disorder prediction 60 80 - -
Dod01g1053 401 MobiDBLite consensus disorder prediction 351 401 - -
Dod01g1053 401 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Dod01g1053 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1053 Dod-Chr1 20825656 20827379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1053 77 180 G2-like Transcription Factor Family AT2G42660 50.000 1.27e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod01g1053 Myb_DNA-binding 8.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1053 - - gsj:114395715 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1053 01 20825656 20827379 Dod01g1053 01 20825656 20827379 ECH