Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1026 ATGGGAAACAATTATTGCTATGTCAAGGATTTTCCCACATACCCTCTTTGGTTTTTACTCTCTTGTGCAACTACAGTTTCTGAATGTTTCAATGTAGCTGATTACTGTAGGAGGAGGAAGTGGAGTAATCATTTGCTTGGAAACTGTAGTAGTTTCTTTTGCTTTGCTTTCGTGCTGTTTCTGCAAGCTCTTGCTTCTCAACCAGTCTCAGGACAATGGTGGGATGGTGTGGCTGTGACTCAATCAGATTACCAAGCTCTAAGGGCTTTGAAGCATGAGCTGGTTGACTCCAAAGAGGTTCTGAGCAGCTGGAATGACAGTGGTTTTGGTGCTTGTTCAGGTAGTTGGGCAGGTATCAAATGTGCCAAAGGAGAGGTTATTGCAATTCAGCTTCCTTGGAAGGGTTTGGGTGGACACATCTCAGAGAAAATTGGGCAGCTTCAAGCTCTAAGGAAAGTCAGTCTCCATGACAATGTTCTTGTTGGTCCTGTCCCTTGGTCTCTTGGGTTACTTCCTAATCTTAGAGGTGTTTATCTCTTCAATAACAGGCTTTCAGGTTCTATTCCTCCTTCTATAGGTAATTGTCCAATGCTTCAGTCACTGGATGTTAGCAATAACTTACTCACTGGGGTAATTCCTACTAGTTTGGCAAACTCCACTAGGATATTTAGGCTCAATATGAGCTTCAACTCACTTTCTGGAACCATTCCTAGGAGCTTCACTTTGTCTAATTCTCTCACTATTCTTGCCCTCCAGCACAACAATCTCTCTGGTACTATCCCAGATTCTTGGGGTGGAATGGGAAATAACGCTTCCAAGCTTCAGGTTTTGACCCTTGATCACAATCTCATTTCTGGTAGCATCCCCGTTTCTCTAGGTAGATTGAGTTTGCTTGAAAACATTTCTCTGAGTCATAACCAGATCGTAGGGTCTATTCCTAGTGAACTAGGTGCACTCTCAAGGCTTCAGTTTCTTGATCTATCAAGCAATGCCATCAATGGCAGCTTTCCTGCTAGCTTTTCCAACCTTACTTCTCTTGTTTCATTAAACTTAGAGGGAAACCAACTTGAAAACCATATCCCTGCTACTGTGGACAGATTGGTGAACCTTTCTGTGCTGAACCTGAAGAACAACAAGCTTGACGGCCAAATCCCATCAACAATTGGGAACATCTCAGGCATTAGCCAAATTGACTTGTCCAAAAATAACTTTATGGGAGCAATTCCTGACTCTCTGACTAAACTTGCAAACCTCAGTTCCTTCGATGTCTCTTACAACAACCTGTCAGGTCCTGTTCCATTTCTCCTCTCCAACAGATTCGATTCAAGCTCTTTTACAGGGAATCTTCAGCTATGTGGGTATATCACTTCAAAACCATGCCCTTCACCCCCACCTCAGAGTCTCCTAACTCCATCACCATCACCATCACCAAAGCCTTCTTCCAAGCCACACCAACATAAACTAAGTACCAAGAACATACTCCTCATAGCAGCAGGTGCTCTCCTGTTAATTCTATCATTACTGTGCTGCACTTTGCTGTGTTGTTTGTTTAGGAAAAGGTATTCTTCAAAAGGAAATAATGGCACCAAGGCAGCAACATCATCTGCTAGAAGTGTTGAGAAAGGTACCCCAGCTGGTGGTGGAGTTGAATCCGGAAGTGAAGCTGGTGGGAAACTAGTTAACTTTGATGGGCCACTTGTATTTACAGCCGATGATCTTCTGTGTGCCACCGCAGAGATAATGGGAAAAAGTGCATATGGCACAGCATACAAGGCAACATTAGAGGATGGGAACCATGTTGTTGTGAAGAGGTTGAGGGAGAAATCTACTAAAGGGCAGAAAGAGTTCGAAGCTGAGGTTGCTGCCCTCGGCAAAATTCGACACCAAAACCTCTTGGCTCTTAGAGCCTACTATTTAGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCCAAAGGAAGCCTAGCATCATTCCTTCATGCTAGAGGGCCTGAAACTGCCATTGAATGGCCCACAAGGATGAACATAGCCATTGGAGTCACTCATGGTTTGAACCACCTCCATAAGCAAGAGGATACAGTACATGGGAATCTTACTTCAAGCAATATACTGTTGAATGAGCAAACAAATGCACACATTACAGATTATGGTCTTTCAAGGCTAATGACCACTTCTGCCAACACCAACATCATTGCTACTGCTGGAAGCCTTGGTTACAATGCACCAGAGCTTTCAAAGACCAAGAAGCCTAACCAACAGACTGATGTTTATAGCCTTGGTGTCATCATTTTGGAGCTCCTAACTGGTAAGCCGCCAGGTGAGCCAACCAATGGCATGGACTTGCCTCAATGGGTGGCATCAATAGTCAAAGAGGAGTGGACAAATGAAGTATTTGATTTGGAGCTGATGAGGGACGCAGCAGCCATAGTTGATGAGCTGCTTAATACATTGAAACTGGCCCTGCATTGTGTGGATCCATCTCCAGAAGAAAGGCCAGAAGTTCAGCAAGTCCTCCAGCAATTGCAGGAGATCAAACCTGACTTGGTTGCAGGTGATGATGGGGCAAAAGTCCAAGCAACTGAATAA 2592 0.441 MGNNYCYVKDFPTYPLWFLLSCATTVSECFNVADYCRRRKWSNHLLGNCSSFFCFAFVLFLQALASQPVSGQWWDGVAVTQSDYQALRALKHELVDSKEVLSSWNDSGFGACSGSWAGIKCAKGEVIAIQLPWKGLGGHISEKIGQLQALRKVSLHDNVLVGPVPWSLGLLPNLRGVYLFNNRLSGSIPPSIGNCPMLQSLDVSNNLLTGVIPTSLANSTRIFRLNMSFNSLSGTIPRSFTLSNSLTILALQHNNLSGTIPDSWGGMGNNASKLQVLTLDHNLISGSIPVSLGRLSLLENISLSHNQIVGSIPSELGALSRLQFLDLSSNAINGSFPASFSNLTSLVSLNLEGNQLENHIPATVDRLVNLSVLNLKNNKLDGQIPSTIGNISGISQIDLSKNNFMGAIPDSLTKLANLSSFDVSYNNLSGPVPFLLSNRFDSSSFTGNLQLCGYITSKPCPSPPPQSLLTPSPSPSPKPSSKPHQHKLSTKNILLIAAGALLLILSLLCCTLLCCLFRKRYSSKGNNGTKAATSSARSVEKGTPAGGGVESGSEAGGKLVNFDGPLVFTADDLLCATAEIMGKSAYGTAYKATLEDGNHVVVKRLREKSTKGQKEFEAEVAALGKIRHQNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPETAIEWPTRMNIAIGVTHGLNHLHKQEDTVHGNLTSSNILLNEQTNAHITDYGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPNQQTDVYSLGVIILELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAAAIVDELLNTLKLALHCVDPSPEERPEVQQVLQQLQEIKPDLVAGDDGAKVQATE* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1026 863 Gene3D Ribonuclease Inhibitor 238 335 IPR032675 -
Dod01g1026 863 Gene3D Transferase(Phosphotransferase) domain 1 653 855 - -
Dod01g1026 863 Gene3D Phosphorylase Kinase; domain 1 581 652 - -
Dod01g1026 863 Pfam Leucine rich repeat 318 356 IPR001611 GO:0005515
Dod01g1026 863 Pfam Leucine rich repeat 198 256 IPR001611 GO:0005515
Dod01g1026 863 Gene3D Ribonuclease Inhibitor 79 237 IPR032675 -
Dod01g1026 863 MobiDBLite consensus disorder prediction 525 554 - -
Dod01g1026 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 851 - -
Dod01g1026 863 ProSiteProfiles Protein kinase domain profile. 575 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g1026 863 SMART LRR_typ_2 415 438 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 196 218 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 319 342 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 343 366 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 295 318 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 367 391 IPR003591 -
Dod01g1026 863 SMART LRR_typ_2 171 195 IPR003591 -
Dod01g1026 863 MobiDBLite consensus disorder prediction 462 485 - -
Dod01g1026 863 MobiDBLite consensus disorder prediction 462 480 - -
Dod01g1026 863 MobiDBLite consensus disorder prediction 525 540 - -
Dod01g1026 863 CDD STKc_IRAK 581 834 - -
Dod01g1026 863 Pfam Leucine rich repeat N-terminal domain 81 121 IPR013210 -
Dod01g1026 863 SUPERFAMILY Protein kinase-like (PK-like) 579 847 IPR011009 -
Dod01g1026 863 SUPERFAMILY L domain-like 120 469 - -
Dod01g1026 863 Gene3D Ribonuclease Inhibitor 336 462 IPR032675 -
Dod01g1026 863 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 38 851 - -
Dod01g1026 863 Pfam Protein tyrosine and serine/threonine kinase 579 843 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1026 Dod-Chr1 19202172 19205193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1026 62 848 Receptor kinase-like Gene Family AT3G51740 67.344 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod01g1026 PK_Tyr_Ser-Thr 9.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1026 - - gmx:100799290 1197.19