Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1009 ATGGGGGCCTGTTGCAGCCATGATGTTGCTGTTCGAGGCAAGGTGGAGAGCGAGATGGATGATGTCTCATATGACCTTAATTATGAGAATGATGTCTCTAATGGATATGGAGGAGAGATAATAAGGTTGAGAGGGTTCTCTAGTGTTGTATCAATGTACACACAACAGGGTAAGAAAGGTGTGAATCAAGATGCTATGGCAGTTTGGGAGGACTATACTGGAGAAAAAGGTGTGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGGCACAGGGTTTCACAATATATCCGTGACAATCTACCCTCAAAACTGTCTGCAGCTGTCAAATTGGCACAACAGAAGGCCAGCAACTATGATAATGCTAATGATGCAGATACTGGCACTGTTGATGAGACTAACAAAAACCTGTCCCTTGCTTCATGGGAGGGATGTTTTCTCAAGTCCTTCAATGAAATGGATGAAGACCTTGCCAAGGACATCAACACTGACAGCTATTGCAGTGGTAGCACCGCTGTGACCGTGATTAAACAGTGTGACCAGCTGATAATTGGCAATTTGGGCGATTCTCGGGCAGTTCTTTGCACAAGAGGGGATAGAGACCAGCTTATTGCTGTGCAACTTACTGTTGACTTGAAACCAGATCTTCCAAGTGAAGCTTCAAGAATCGTGAACTGCGAAGGCAGAGTTTTCGCGGCAGAAGAAGAACCGGATGTGTGCAGAATATGGATGCCTGATGATGACTGCCCTGGACTAGCTATGTCAAGATCCTTTGGAGACTTCTGCCTGAAAGATTATGGCCTCATCTCGATTCCTGACGTGTTTTACAGAAAACTTACTGAGCAAGATCAATTTGTGGTTTTGGCAACTGATGGGGTATGGGATGTGCTCACTAACAATGAAGTGATAAACATTGTTGCTTCAGCACCAAGCAGGTCCATAGCAGCCAAATTGTTAGTGAAGCGTGCTATTCGAGCCTGGAGATCTCGGTATCCCGGTTCCAAGGTTGATGATTGTGCAGTCATATGCTTGTTTCTGGATGATGATCAGCCTGTTTTATCCCATTCACAATCCAAAAGGGTTGGAGGCAACAGACATCACAGCAAGAACCATCATCATCGCCAAAGATCCACCAGAAACGAAGACAGTTCAACTGTGGTTGGCAAGGTTGGGGTGGAACTGGATCAAGAATGGAAAGCTCTTGGAGGGTTAGCTAGAAACAACTCTATATCAAAACTTCCAAGGCATGCTAGGGAATTGAGTAAACGGCAATCATCTAATAGGTTCCATGAAGGGAGTTGA 1305 0.4506 MGACCSHDVAVRGKVESEMDDVSYDLNYENDVSNGYGGEIIRLRGFSSVVSMYTQQGKKGVNQDAMAVWEDYTGEKGVIFCGVFDGHGPLGHRVSQYIRDNLPSKLSAAVKLAQQKASNYDNANDADTGTVDETNKNLSLASWEGCFLKSFNEMDEDLAKDINTDSYCSGSTAVTVIKQCDQLIIGNLGDSRAVLCTRGDRDQLIAVQLTVDLKPDLPSEASRIVNCEGRVFAAEEEPDVCRIWMPDDDCPGLAMSRSFGDFCLKDYGLISIPDVFYRKLTEQDQFVVLATDGVWDVLTNNEVINIVASAPSRSIAAKLLVKRAIRAWRSRYPGSKVDDCAVICLFLDDDQPVLSHSQSKRVGGNRHHSKNHHHRQRSTRNEDSSTVVGKVGVELDQEWKALGGLARNNSISKLPRHARELSKRQSSNRFHEGS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1009 434 Gene3D - 45 350 IPR036457 -
Dod01g1009 434 PANTHER ALPHABET, ISOFORM E-RELATED 1 408 - -
Dod01g1009 434 Pfam Protein phosphatase 2C 75 326 IPR001932 -
Dod01g1009 434 SUPERFAMILY PP2C-like 45 349 IPR036457 -
Dod01g1009 434 SMART PP2C_4 39 345 IPR001932 -
Dod01g1009 434 MobiDBLite consensus disorder prediction 413 434 - -
Dod01g1009 434 MobiDBLite consensus disorder prediction 410 434 - -
Dod01g1009 434 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 408 - -
Dod01g1009 434 MobiDBLite consensus disorder prediction 361 375 - -
Dod01g1009 434 ProSiteProfiles PPM-type phosphatase domain profile. 49 347 IPR001932 -
Dod01g1009 434 MobiDBLite consensus disorder prediction 356 387 - -
Dod01g1009 434 CDD PP2Cc 49 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1009 Dod-Chr1 18926767 18930459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1009 1 348 PP2C-type Phosphatase Gene Family AT5G01700 53.161 1.02e-129 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1009 - - gmx:100783603 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1009 01 18926767 18930459 Dod07g1626 07 43623006 43632583 PCT