Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1004 ATGAGGACATCATCCTTCACAGACCTTCTTTCCAACAACAATAGTAGCATGACCATGGATGATGATAACTGGGGAACTTCTGAACTTAAATATGACCAAGGTGTTGGACTTGATGCTCCAAAATTCAAGTCTGTCACACCTCCTTCACTGCCCCTATCTCCCTCACCAATTTCCCCTTCTTCTTACTTGCCTAATTGCTCATCTGGTTTCAGCCCATCTGAGTTCTTGAACTCACCTTGGTTTCTTTCCTCTCCAAATTTTTTTGCATCTCCTACTACTGAGGCTTTTGCAAATCAGAGCTTCAATGGGAGGAACAGTTCAGGAGAGGACCAACAAGGTCACAACAAGGTGGATGAGAAAAACTTCTCTGACTTCTCTTTCCAAACACAAACTAAGCCTTCATCTCTCTTTCAAGCAGAACCACTTAAGAGAGAAGACGTGTGGAAATTCAGTGAAACTGTAAACCCAACTGATTTGTCATCTGAGAGGGCAGCAACAAAATCTGAGTATCCATCAACTCAGAGTTTTCCCTCAGAAATGGCAGCAAGCAAACCAGAAATGCAAAGCAATTTAGTGCCTGAGTCTGGTTCTTTCAACTACACTACTGCATCTCAGTCTGTTAGAGAACAAAGGAGAACAGAAGATGGGTACAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGCGAAAATCCGCGCAGTTATTACAAGTGCACGCATCCGAATTGCATGATGAAGAAGAAAGTTGAGAAGACTTTGGATGGACAAATCACTGAGATAGTATACAAGGGAACTCATAACCACCCCAAGCCACAGTCTACCAGAAGAACAAGCTCTCAGTCAATTCATCAACCTTCTTCTTCCTGCACCAATTCAGGGATTTCTGATCAGTCAGTGGTGACCCTAGGCAATTCACACATGGATCATGTCTCCATACAAGATGATTCTTCAGCCTCTGTGGGAGAGGAAGACTTTGAGCAAACATCACAAACCAGTTTTTCTGGAGGAGATGAAGATGAACATGGACCAGAGGCCAAAAGATGGAAGGGAGAGAATCAAAATGATGGCTATTCTGCCTACGGGAGTAGAACTGTTAGGGAACCAAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAGGTAGTCAAAGGAAACCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAGCATGTCGAGCGAGCTGCACATGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGATGTACCTGCAGCACGCGGGAGCGCAGGTTATAACACAAATAGAAATTCTCTGAACAGCAACAATAGCAATGTACCGGCTCCGGCACCTATAAGGCCATCAGCGGTGAATGGTTATTCTAGCTCACAAAGCTTCACAAATTCACTTTACAATACTAGGCTTCCAACAACCGGAAGTCAAGAATCATTTTTTCAGGACATGTTGCAGAACCCTGGAAGTTTTGGCTATTCAGCTCTTGGCAGATCAGATGGTTCACATGCCAATCATGCACAATACTCAGATGCTGCATACACTAAGGCCAAGGATGAGAAGAAGGATGATTCATTCATTCAGTCATTTCTGTCAAAGAACTTCTGA 1674 0.4301 MRTSSFTDLLSNNNSSMTMDDDNWGTSELKYDQGVGLDAPKFKSVTPPSLPLSPSPISPSSYLPNCSSGFSPSEFLNSPWFLSSPNFFASPTTEAFANQSFNGRNSSGEDQQGHNKVDEKNFSDFSFQTQTKPSSLFQAEPLKREDVWKFSETVNPTDLSSERAATKSEYPSTQSFPSEMAASKPEMQSNLVPESGSFNYTTASQSVREQRRTEDGYNWRKYGQKQVKGSENPRSYYKCTHPNCMMKKKVEKTLDGQITEIVYKGTHNHPKPQSTRRTSSQSIHQPSSSCTNSGISDQSVVTLGNSHMDHVSIQDDSSASVGEEDFEQTSQTSFSGGDEDEHGPEAKRWKGENQNDGYSAYGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKSVITTYEGKHNHDVPAARGSAGYNTNRNSLNSNNSNVPAPAPIRPSAVNGYSSSQSFTNSLYNTRLPTTGSQESFFQDMLQNPGSFGYSALGRSDGSHANHAQYSDAAYTKAKDEKKDDSFIQSFLSKNF* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1004 557 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 317 554 - -
Dod01g1004 557 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 27 310 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 158 207 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 338 352 - -
Dod01g1004 557 Pfam WRKY DNA -binding domain 214 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 Pfam WRKY DNA -binding domain 383 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 MobiDBLite consensus disorder prediction 268 298 - -
Dod01g1004 557 SMART WRKY_cls 213 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 SMART WRKY_cls 382 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 ProSiteProfiles WRKY domain profile. 377 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 MobiDBLite consensus disorder prediction 1 23 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 158 235 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 437 470 - -
Dod01g1004 557 Gene3D WRKY domain 369 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 MobiDBLite consensus disorder prediction 264 298 - -
Dod01g1004 557 ProSiteProfiles WRKY domain profile. 208 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 317 554 IPR044810 GO:0003700
Dod01g1004 557 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 310 IPR044810 GO:0003700
Dod01g1004 557 MobiDBLite consensus disorder prediction 314 337 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 1 58 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 98 117 - -
Dod01g1004 557 MobiDBLite consensus disorder prediction 314 363 - -
Dod01g1004 557 SUPERFAMILY WRKY DNA-binding domain 209 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 Gene3D WRKY domain 198 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 SUPERFAMILY WRKY DNA-binding domain 374 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g1004 557 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1004 Dod-Chr1 18857515 18860519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g1004 37 553 WRKY Transcription Factor Family AT2G38470 45.911 1.78e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g1004 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1004 K13424 - gmx:100776837 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1004 01 18857515 18860519 Dod07g1632 07 43655823 43659515 PCT