Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0966 ATGGGGAATTACAGGTTCAAGTTATCAGACATGATCCCAAATGCCTGGTTTTACAAGCTGAGGGACATGAGCAAAGGAAAAAAACAAACACCAACTCAGTCCAGGAAGAAAAAGCAATCTTCACCAGCCTCAACCACAAAAACACAATCATCAAAACCAAAGCAACCCCACCAATGTACTCCAAGAAAGTCTTACTACTTTACAAGGGAGCTTAACACAAGTGACAAAAGAATCCACACCTCACCAGAAAAAAAACAAAACATCTCAGACACCAATTTCCCTCAGCAACCAAGAAAGTCATCACCAAAACAAAGACCTAAAAGAAGAACTGCAAGAACATCCTCACCTAAGCTTGTTGTCACTGCTAATTGTAGCTGCCACAACACCACCACCACCACCACCACCACCACCGTTGAATCCATTTCAACCAAGTCCACTTCCCCACCTGAGTACTCATCATCTCCACTTGATAGCTCAGCTGAATCAGAGTTCCCTGAGCCAGAATTCAGAACAGACCGTGTTCTCACCACTGAGTCATTTGATGAAGAAACGGTTCCATCATGGTCCAACTCAAACTCTAGCTGTGGCTGCAGGGTCCACTACTCCAACACCAATGACATCATCATAGATGTGGACAACAATTCCATAGCCAGAAAAGATAACAAGCTAGATGGTTATGAGTCCCTTTCAGACCTTGTGCTTCCACCAATTGTGACCAAGCCAGCAAAATTCAATGACCTTCTTAGTGATGCAAAGAGGAAAGAAGCCAAACCCAGAAGCAGAATGGCTGCACATGAGGAACTCAACATGAAAGGGTCATTGAAAGTTAAGATTGTGAAGGAGGACAGTGCATCAGTGAAGGAACACAGGAACACCCCTTGTAGGAGATTCTCTGTGAGCTCACCTGGGGTTAGGCTAAGGATCAATTCACCTAGAGTTGGGGGCCGGAGAGTTCCGGCACACGGCCGGAAAAGCGTGCCGGCGGCGGCCGGCTCGGTGTCCCGGATGAGCTTATCTGATAGCTTTGCAGTTGTGAAGTCATCATTCAATCCACAAAGGGATTTTAGAGAGTCAATGGTGGAGATGATTGTGCAGAACAACATTAGGACTTCCAAGGACTTGGAAGATCTTCTTGCTTGCTACCTTTCTCTGAATTCAGATGAGTATCATGACCTCATCATCAAAGTGTTCAAGCAAATATGTTTTCTCTTGGTTAAATAA 1221 0.4488 MGNYRFKLSDMIPNAWFYKLRDMSKGKKQTPTQSRKKKQSSPASTTKTQSSKPKQPHQCTPRKSYYFTRELNTSDKRIHTSPEKKQNISDTNFPQQPRKSSPKQRPKRRTARTSSPKLVVTANCSCHNTTTTTTTTTVESISTKSTSPPEYSSSPLDSSAESEFPEPEFRTDRVLTTESFDEETVPSWSNSNSSCGCRVHYSNTNDIIIDVDNNSIARKDNKLDGYESLSDLVLPPIVTKPAKFNDLLSDAKRKEAKPRSRMAAHEELNMKGSLKVKIVKEDSASVKEHRNTPCRRFSVSSPGVRLRINSPRVGGRRVPAHGRKSVPAAAGSVSRMSLSDSFAVVKSSFNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQICFLLVK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0966 406 MobiDBLite consensus disorder prediction 23 169 - -
Dod01g0966 406 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 342 405 IPR006458 -
Dod01g0966 406 Pfam Transcriptional repressor, ovate 348 403 IPR006458 -
Dod01g0966 406 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 130 - -
Dod01g0966 406 MobiDBLite consensus disorder prediction 114 160 - -
Dod01g0966 406 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 148 404 - -
Dod01g0966 406 MobiDBLite consensus disorder prediction 85 100 - -
Dod01g0966 406 MobiDBLite consensus disorder prediction 69 84 - -
Dod01g0966 406 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Dod01g0966 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 130 IPR038933 GO:0045892
Dod01g0966 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 148 404 IPR038933 GO:0045892
Dod01g0966 406 MobiDBLite consensus disorder prediction 35 68 - -
Dod01g0966 406 ProSiteProfiles OVATE domain profile. 344 403 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0966 Dod-Chr1 17784664 17786687 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod01g0966 Ovate 3.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0966 - - aprc:113863721 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0966 01 17784664 17786687 Dod01g0966 01 17784664 17786687 ECH