Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0963 ATGGAATTATCTGATACAATCAAGCCAGCCATGTACAAAGGGAGATTAGGAGGCAGCACTGGTGGTGGATTCAAGGCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTAGATACGGGCGTTTCAGGGATGTTCTGGGCAAAGGAGCTATGAAGACTGTGTATAGGGCCTTTGATGAGCTCCTAGGAATAGAAGTGGCATGGAACCAAGTCAAGCTTGGTAATGCCTTTCATTCACCAGAACAACTCCAGCGACTTTATTCAGAGGTTCATCTCCTTAAGCACCTCAGCCACGATTCTATGATGATCTTCTATGGTTCATGGATCGATGTCAATTGCAGAACCTTCAACTTCATCACCGAATTATTCACATCTGGCACCCTTAGAGAGTATAGGCAGAAGTATAGGCGAGTAGATATCCAAGTAGTGAAGAATTGGGCACGCCAGATTCTTAGTGGTTTGGAGTATTTGCACAGCAACATTCCTCCTGTAATTCATAGAGATCTCAAGTGTGACAATATATTTGTCAATGGCCATTTGGGGCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCTATACTTCGTAGCTCCCAACCTGCTCACAGTGTAATAGGCACACCAGAATTCATGGCACCAGAATTATATGAAGAGGAATACAATGAGCTTGTAGACATATACTCATTTGGGATGTGTATGATAGAGATGCTTACTTTTGAGTTTCCATACAGTGAGTGCTTCAACCCTGCTCAAATATACAAGAAAGTAACCTCGGGGAAGCTACCAGATGCATTTTACAAAATCAAAGATTTGGAAGCCCAAACGTTTGTGGGGAAATGTTTGGCACATGTCTCAAAGAGGCCTTCAGCAAAGGAGCTCTTGCTGGACCCATTTTTAGCCACGGAACAAATGGAATTGCCATTGGTGCCAATCACACCATTATCCACAGATCAAACTCTAAAGCTTAATTCCTCTGCAGCAGTAGTTGCAATTGAGTATCTTTCAATGTGTGATCAGGCAAAGAGCACAAACATGTCAATCACTGGGTCAATGAATGAAGAGGGCACCTCAGTTTTCCTTAAAGTGCAGATATGTGACAATAATGGGCATGCAAGAAATATATTCTTTCCATTTGACACAATAAAGGACACTGCTATTGAGGTAGCGATGGAGATGGTCAAGGAGCTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAAGGACCAGGGTACTAGTCAGCACCAACGACAGCACAGCTTTAACTTTGCAGAAGATATGGATATGGATATCAATAACCATCATCCTTTCTTTGTAGCATCTTCTCCATCTTCCCCTCATGGCTCACTCGCCATGTCAGGTTCCTCCTGCAGGACCCTCTTTCGTGGTGGGAACCATTACTCATTTGCTCCAGAATGGCCTCAAGATGAACTGTCATGTATGAACGATGATTCGAGTTCTCAAAGCTCATTGAACTCCATCAAGAGCTCCAACGTCCAATACTGCGACTCAAGCAATGAAGATGAGCATGGACCAACACTGGAGGCAGATCATGGAGGAGCTGAACCCCTTTCCCACACACACAAGGCCCTCAACAAGTGCACAACATTACATTGCCCTCGTGAAGAGTTAGAAGCTAGTTTCACCAGAAAGCTTTGCAACCCAAGAACAATGCACCCTAGTTGCGTGTGTGGTAATGGGTCAAGGCATCATGGATCCCCTAGGCTAACGAGGATTCGTTCTTGCGTGGACGAGAGGAGGAGCCAGCAGCTTCAACGATTGCTTATGCTGGAGGAGGCTTACAAGTACAAGAGACGCATGTTCAACACTGTTGGGGCCATGGAGAACATTGGGTTTCGCTATCCAGAAAGAGGTGGTGGATGCCACAGTCGTTAA 1935 0.4486 MELSDTIKPAMYKGRLGGSTGGGFKAQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGNAFHSPEQLQRLYSEVHLLKHLSHDSMMIFYGSWIDVNCRTFNFITELFTSGTLREYRQKYRRVDIQVVKNWARQILSGLEYLHSNIPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRSSQPAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFEFPYSECFNPAQIYKKVTSGKLPDAFYKIKDLEAQTFVGKCLAHVSKRPSAKELLLDPFLATEQMELPLVPITPLSTDQTLKLNSSAAVVAIEYLSMCDQAKSTNMSITGSMNEEGTSVFLKVQICDNNGHARNIFFPFDTIKDTAIEVAMEMVKELEISHLEPLEIAAMIDHEVSALVPTWKDQGTSQHQRQHSFNFAEDMDMDINNHHPFFVASSPSSPHGSLAMSGSSCRTLFRGGNHYSFAPEWPQDELSCMNDDSSSQSSLNSIKSSNVQYCDSSNEDEHGPTLEADHGGAEPLSHTHKALNKCTTLHCPREELEASFTRKLCNPRTMHPSCVCGNGSRHHGSPRLTRIRSCVDERRSQQLQRLLMLEEAYKYKRRMFNTVGAMENIGFRYPERGGGCHSR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0963 644 SMART serkin_6 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0963 644 PANTHER WNK KINASE 3 637 - -
Dod01g0963 644 SUPERFAMILY Protein kinase-like (PK-like) 42 339 IPR011009 -
Dod01g0963 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Dod01g0963 644 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 637 - -
Dod01g0963 644 MobiDBLite consensus disorder prediction 514 537 - -
Dod01g0963 644 Gene3D Phosphorylase Kinase; domain 1 25 121 - -
Dod01g0963 644 Pfam Protein kinase domain 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0963 644 MobiDBLite consensus disorder prediction 521 537 - -
Dod01g0963 644 CDD STKc_WNK 38 298 - -
Dod01g0963 644 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0963 644 Gene3D Transferase(Phosphotransferase) domain 1 123 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0963 Dod-Chr1 17705678 17713145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0963 28 441 MAP Kinase Kinase Kinase AT3G51630 68.193 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod01g0963 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0963 K08867 - gmx:100272206 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0963 01 17705678 17713145 Dod01g0963 01 17705678 17713145 ECH
Dod01g0963 01 17705678 17713145 Dod07g1669 07 44473439 44477703 PCT