Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0956 ATGGGCTGTTTCACAGTTTTGAAGAGCAAGAAGAAAAAGCCTGAGCAAATTGCATATGTAAAACGTGTAAACCACGGCGAGCATGTACCTACGGCATTGCCTGAACCTAAAAGTCACACTCGCTCACTCCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTTAAACCAATTCAACCCATTAACAAAGTCACTAACAATAGAATGCGAGCGCTGTCTGCTCCATCAACTCTCGATGCAGCAGAACAAGATGCGTTGGCCTCAGTTGACTATGAAGAACAAGAAGAGCCAAGGTCCCGAGCTGGATCAATGAAGGAGCAGCATTCATCTAGTCCACAACCTTTACCTCTTCCATCTCCTAAGGGTGGTGGTTCATTGAAGAATATGGGCAGCTTTAAGTTAGGGACAGCTAGTGCTCCTCTACATACTTCTGGGCCTTTGCCGCTCCCACCTACTGGGTCACTTAGAAACTTTCTGTATGAGGATATTGCAGCTGCTTGTCACAATTTCTCCTCGGATCGGTGCATGTCAGAATGTCTTTCTTCAACCATATATAAAGCTTCATTTGGTGATGAAGCTTCAAGTTCAAAGAAGTTTGAAGCCACAGTCACACGCCTTCACCCATCAATTCAGGGCTTAAAGGAATTCATAAATGAGGTTAATACTCTAGCATCTTTGCAGCATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGTGAAGGTTCAGACCAGAGAATGTTGGTTTACGAGAGGCTTTACCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGACGGCCCATCGCTTGATTGGAATACAAGAATGAAAATTGTGATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTTTCAACGGCCAACATACAGATAGACAAAGATTTCAGCGCAAAGCTTTCAGGATACGGTTGTGTTGGACATATCCCCGAGGAAGAGATTTCAAGCAGTTCACCTGCTGTTGGGAACCTATCAGTGGAGACACTGGAAAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGTTTTGGAATCTTTCTCCTTGAGCTTCTTACTGGGAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAATTTGGTCAAGTGGAGCCGGCCTTACCTAGCTGACGATCATCGACTGTCATTGATAATGGATCCTCAACTCAAAGGTCGCTTTCCTTCTAAAGCGGCAAGAACAATGGCTGATATTGCACAAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCGACCATGAGAACTGTAGTCAAGCATCTCAAAATGATACAGGATTTGAAGTACTCTTGCCGGTTCCCGCTGCAAGAACCGGCCACCATCTCCGGAAAACACATGTCAAGATCACCAAGTCTTAATGGCATCATCAGCCCTGCACCTAGGTTGAGTTCCTCTCCATCGCCACCAGCAGGAGCCCCACCATCTGTTTCGCCTCCAAGGTGGTCCGGAGTGCCCGTCCTCCTTCCCCCACGTGCATGTTCCTCCACTCTCTCCTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGGAGGGCCAGTGTGGAAGGATATTGA 1641 0.4674 MGCFTVLKSKKKKPEQIAYVKRVNHGEHVPTALPEPKSHTRSLQSAPPSFRTRVKPIQPINKVTNNRMRALSAPSTLDAAEQDALASVDYEEQEEPRSRAGSMKEQHSSSPQPLPLPSPKGGGSLKNMGSFKLGTASAPLHTSGPLPLPPTGSLRNFLYEDIAAACHNFSSDRCMSECLSSTIYKASFGDEASSSKKFEATVTRLHPSIQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSDQRMLVYERLYHGSLDRLLYGRSDGPSLDWNTRMKIVICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSPAVGNLSVETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPYLADDHRLSLIMDPQLKGRFPSKAARTMADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLQEPATISGKHMSRSPSLNGIISPAPRLSSSPSPPAGAPPSVSPPRWSGVPVLLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGY* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0956 546 MobiDBLite consensus disorder prediction 37 51 - -
Dod01g0956 546 MobiDBLite consensus disorder prediction 485 508 - -
Dod01g0956 546 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Dod01g0956 546 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 47 143 - -
Dod01g0956 546 MobiDBLite consensus disorder prediction 22 67 - -
Dod01g0956 546 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0956 546 PANTHER OS01G0588500 PROTEIN-RELATED 149 539 - -
Dod01g0956 546 MobiDBLite consensus disorder prediction 464 546 - -
Dod01g0956 546 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Dod01g0956 546 MobiDBLite consensus disorder prediction 465 484 - -
Dod01g0956 546 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Dod01g0956 546 PANTHER OS01G0588500 PROTEIN-RELATED 47 143 - -
Dod01g0956 546 MobiDBLite consensus disorder prediction 88 145 - -
Dod01g0956 546 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 149 539 - -
Dod01g0956 546 SUPERFAMILY Protein kinase-like (PK-like) 147 456 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0956 Dod-Chr1 17506547 17510951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0956 148 448 Receptor kinase-like Gene Family AT4G02010 37.582 5.47e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Dod01g0956 PK_Tyr_Ser-Thr 3.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0956 - - gmx:100808712 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0956 01 17506547 17510951 Dod01g0956 01 17506547 17510951 ECH
Dod01g0956 01 17506547 17510951 Dod07g1679 07 44650525 44653054 PCT