Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0955 ATGGGATGGACGACTGTAAGCGCAGGCAAGGCGGCAGCGGCAATCACGGTTGGCGTGCAGCGGCTGTTGCTTAGGAATAGAGCTTGTGGGCGACATAGCTCGTGGGGGTGGCATAGCAGCTTGGCGAGGACGCGTAGCGGAGGAGGGCAAATGGGCATGGTGGCCGTTTGCATGCGAGGTAGCGACACTGGCTGCTGTTGGTGCATTGAGCTTGTTGTGCAGTGCAGTCGTGCAGCGAGTGGTTCGCAACTGGCATGCGGCGATGGGAGGGTGCGCGACTGCAATGGAGGAGGAGGAGGAAGCTGCGGGCTTGTGGTGATGAGGCTTGGCGGAGGTCGCGGCCTCTCTCCTCCTCTTGTTGCTCTTTCTGATTTTTTTTTTTTTGGGATTTTTGTGTTTTGTTTGGGATTTGATCAGGACGTTATTGCTGTTGGGTTATGGCTGCATTTGGAAACTTGCAGAATCGCGTTCGAAAAAATGGATTTAAGGCGATGCATGAATGTGGCATGTGGCACATCCTCCGCGTCGATGCGGTGGCGTAAAGGCTGGGTGCTGCGATCTGGCGATTTCGCCATTCTTTGCGATAAGTGCGGGTATGTTTATGAGCAATCAAAATTTTGTGATGTGTTCCATTCCAACAGTTCTGGTTGGAGACAGTGCGATTTTTGTGGCAAGTATCTTCATTGCGGATGCATTGCCTCTCAATATCTGTTTGAGTTACAAGATACCGGTGGTATAAGCTGTATAATATGTGCGAGACATTCAAGACCTCAACCTACCTCAAGTATTCTTGGAAAGCATGATGGATCCGGGACATCAAGGATAGAAAATGTCAATGAAGTGCAAGGTACATCTGTGACTAATCAATTCATAGTGAGGGACTTTGCAGAGAATGATGGGATGAGGTGCTGGCTCAAACCTCACAATGATGTTGGTCCAAATGCTTCTTATGTGGGAATGAAACAAGATGAAATCTTGCCTTATATTCAAGAACTGGGAAGCAGTTTGGTATCTTATTTTCATCCGGGATCTAGTTCAAGTGGATCATCACTGGCTCAAACAAATTTGAGCATGACCCTTGGTTCTCCTTTAGGGAATTCAAATCCCTTCTTCCATAGTGCTATTGTTGATGAAAGGGAGAAAATGAAAACATCACTTCCAATTCTACATGGGCCAAATTTTAGCCCTATTTTACCCTTGTTCCCTCTGTCAACTTCTGCTTCAGGCTTAGAGGCAAATAATGCAAGCATGGCACCAAGGACTAGTGTTGCAATGGCAGCACCTCCTACAAGTCGGGGAAGGAATCAGCAATTGGTTGCCCGCTATTGGCCTAGGATCACTGATGAAGAGTTACAGCAAATATCTAGAGATTCAAATTCCACCGTTATGCCTCTGTTTGAGAAAGTGCTTAGTGCAAGTGATACTGGTCCAATTGGTCGCATAGTCCTTCCAAAGGCATGTGCTGAAGGTGAGTTTGGTATGGGTAAAAATTCAGCTGAAAGGCATATCTTCCTCCTATTTCACAACCTGAAGGCCTTCCTCTACAAATCCATGATGTGCAAGGAAACGTATGGGATGTGCAATTCAGGTTTTGGCCCAATAATAATAGTAGGATGTACTGTGTTAGATGGTGTAAGCCCCTGCATTGAGTTCATGAAGTTGAAAGCTGGAGATACTGTAACATTTAGCCGTATGGACCCAGAGAGGAAAATTATTATGACAGTTCGTCGGAAGCCGCCATTGCCACCGCCGTGCCCTCCTCCACCACCACCACCACCATCTGCTGCTGCACAGGTGATAGCTACTCTTGGGTTAGCAGAGCCAAATCTTCTGAATTCGTGTTTAGTGTCTTCACTAATTGGAAGTTCACATCCCTGCGCACAAGATACTACAACATCGGAAGGCAGGAAAAGAGAGGGTTTGGATTTGCCACCAGCGCCGGTTCCCAAGAAGAAAAGAACTCTGAATATTGGTTCAAAGAATAAGAGGTTGCATATTGAAAACCAGGATGCACTTGAGCTGAAAGTTACATGGGAAGAGGCTCAGGATTTGTTTCTTCCATCACCAGCAGTTAACCCATCCCTTGTCATGATCGATGATCTATTATTTGAAGAATATGAAGACCCTCCTATCATTAGGACGAGGAGTATATTCATGGTCCGTTCAAATGGGATAAATGAGCAATGGGCACAGTGTAATAGTTGTTCAAAATGGAGTAAACTACCTGCTGATATACTTCTCCCTGCTGAGTGGACATCCGTGGATAATATATGGGATCAGAGCAGGTGTACATGTTCTGCTCCCAATGAATTGACCCCAAGGGAACTGGATAATCTTGTGAATATGAAGAATAATAAGGGATTCAAGGAACAAAGAGTGGAAGGAAGCCCTGAGCGAACTCTGGAGCCTGAATCTTCTGGACTGCATACGTTGGCAGATGCTGCACTACTTGAAGTCAATAATGGAGGTAACTATAGCAGGACAAAACACACAGAGCATGTACCTGGTTCCTCCTGCAATGTCTGTGTCCAGCAACCAAGTGGAAAGGGCAAACACAAAGCTTCGTGCACCTGCAATGCATGCATGACAGTTAAAAACCAGATTAAGACCCTGATGATGCAAGAGATGAATCGTCAATCCGAACGAGAAGCAGGGGTTGCTCAGAGGTATAAGCAATTTGTGAGAGTCGGTGGTGGATCAGAAGGAAAAAGCACTTCTCAAATCTCAACTCCAGTTGACTCAGCAAATGGAGCAAAGGTGCCAACTGAAGCTGCCAAGGTGCAGTTAGACTTGAATTGCCAACCTGCAGATTTGGAGTAA 2820 0.4617 MGWTTVSAGKAAAAITVGVQRLLLRNRACGRHSSWGWHSSLARTRSGGGQMGMVAVCMRGSDTGCCWCIELVVQCSRAASGSQLACGDGRVRDCNGGGGGSCGLVVMRLGGGRGLSPPLVALSDFFFFGIFVFCLGFDQDVIAVGLWLHLETCRIAFEKMDLRRCMNVACGTSSASMRWRKGWVLRSGDFAILCDKCGYVYEQSKFCDVFHSNSSGWRQCDFCGKYLHCGCIASQYLFELQDTGGISCIICARHSRPQPTSSILGKHDGSGTSRIENVNEVQGTSVTNQFIVRDFAENDGMRCWLKPHNDVGPNASYVGMKQDEILPYIQELGSSLVSYFHPGSSSSGSSLAQTNLSMTLGSPLGNSNPFFHSAIVDEREKMKTSLPILHGPNFSPILPLFPLSTSASGLEANNASMAPRTSVAMAAPPTSRGRNQQLVARYWPRITDEELQQISRDSNSTVMPLFEKVLSASDTGPIGRIVLPKACAEGEFGMGKNSAERHIFLLFHNLKAFLYKSMMCKETYGMCNSGFGPIIIVGCTVLDGVSPCIEFMKLKAGDTVTFSRMDPERKIIMTVRRKPPLPPPCPPPPPPPPSAAAQVIATLGLAEPNLLNSCLVSSLIGSSHPCAQDTTTSEGRKREGLDLPPAPVPKKKRTLNIGSKNKRLHIENQDALELKVTWEEAQDLFLPSPAVNPSLVMIDDLLFEEYEDPPIIRTRSIFMVRSNGINEQWAQCNSCSKWSKLPADILLPAEWTSVDNIWDQSRCTCSAPNELTPRELDNLVNMKNNKGFKEQRVEGSPERTLEPESSGLHTLADAALLEVNNGGNYSRTKHTEHVPGSSCNVCVQQPSGKGKHKASCTCNACMTVKNQIKTLMMQEMNRQSEREAGVAQRYKQFVRVGGGSEGKSTSQISTPVDSANGAKVPTEAAKVQLDLNCQPADLE* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0955 939 MobiDBLite consensus disorder prediction 897 917 - -
Dod01g0955 939 MobiDBLite consensus disorder prediction 631 646 - -
Dod01g0955 939 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 163 492 - -
Dod01g0955 939 Gene3D - 444 580 IPR015300 -
Dod01g0955 939 MobiDBLite consensus disorder prediction 625 652 - -
Dod01g0955 939 Gene3D - 726 782 - -
Dod01g0955 939 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 163 492 - -
Dod01g0955 939 MobiDBLite consensus disorder prediction 899 916 - -
Dod01g0955 939 ProSiteProfiles Zinc finger CW-type profile. 723 773 IPR011124 GO:0008270
Dod01g0955 939 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 541 936 - -
Dod01g0955 939 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 541 936 - -
Dod01g0955 939 CDD B3_DNA 464 577 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0955 Dod-Chr1 17479180 17497399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0955 162 878 B3 DNA Binding Superfamily AT4G32010 40.574 1.31e-155 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0955 - - gmx:100778833 749.199